Evidence map›Paper›PMID 40097484›Full record

ArticleScientific reports2025

Comprehensive understanding of context-specific functions of PHF2 in lipid metabolic tissues.

Do-Won Jeong, Jeong-Eun Yun, Kyoung-Hwa Lee, Geon Ho Moon, Ki Yong Hong, Jong-Wan Park, Junji Fukuda, Yong-Seok Lee, Yang-Sook Chun

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Do-Won Jeong *Department of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.
Jeong-Eun Yun *Department of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.
Kyoung-Hwa LeeSongdo Bio-Engineering, Incheon Jaeneung University, Incheon, 21987, Republic of Korea.
Geon Ho MoonDepartment of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.
Ki Yong HongDepartment of Plastic and Reconstructive Surgery, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, 03080, Republic of Korea.
Jong-Wan ParkDepartment of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID https://orcid.org/0000-0003-4676-5191
Junji FukudaFaculty of Engineering, Yokohama National University, Yokohama, 240-8501, Japan.ORCID https://orcid.org/0000-0002-7194-8099
Yong-Seok LeeDepartment of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.
Yang-Sook ChunDepartment of Biomedical Sciences, Seoul National University College of Medicine, 103 Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea. chunys@snu.ac.kr.ORCID http://orcid.org/0000-0002-1261-9498

Funding

Ministry of Science, ICT and Future Planning (MSIP) RS-2024-00344706Ministry of Science, ICT and Future Planning (MSIP) RS-2024-00458826National Research Foundation of Korea (NRF) 2018R1A5A202596423National Research Foundation of Korea (NRF) 2019R1A2C208388615
6 · The paper itself

Abstract

Adipose tissue and the liver are known to regulate lipid metabolism through the storage, synthesis, and breakdown of lipids. However, the shared molecular factors affecting lipid metabolism in both tissues remain unclear. Plant Homeodomain Finger 2 (PHF2), one of the histone lysine demethylase7 family, serves as an epigenetic regulator in adipose tissue and E3 ubiquitin ligase in liver cancer. This study uses bioinformatics to analyze the role of PHF2 in lipid metabolism, focusing on its functions in adipose tissue and the liver. We utilized cDNA-chip microarrays, public clinical data, and in vitro three-dimensional cell culture models, validating our bioinformatics findings. Consequently, our analyses showed that PHF2 is positively involved in histone demethylase activity and adipogenesis in patients with obesity and moderate liver disease. However, PHF2 suppressed de novo lipogenesis and tumor progression in patients with liver cancer, enhancing immune cell infiltration in liver cancer. Furthermore, it was experimentally confirmed that PHF2 increases lipid accumulation in adipocytes but acts as a tumor suppressor in liver cancer cells. Overall, this study provides a comprehensive overview of PHF2, highlighting its biological importance.

Indexed as

Adipose TissueHistone DemethylasesHomeodomain ProteinsLipid MetabolismTranscription FactorsAdipocytesAdipogenesisAnimalsHumansLipogenesisLiverLiver NeoplasmsObesityHistone DemethylasesHomeodomain ProteinsPHF2 protein, humanTranscription Factors

Identifiers

PMID40097484
PMCPMC11914216

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.