Evidence map›Paper›PMID 40097297›Full record

ArticleFEMS microbiology ecology2025

Evaluation of Thiobacillus denitrificans' sustainability in nitrate-reducing Fe(II) oxidation and the potential significance of Fe(II) as a growth-supporting reductant.

Stefanie Becker, Thu Trang Dang, Ran Wei, Andreas Kappler

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Isolation of 'International journal of systematic and evolutionary microbiology · 2025
    Article
  4. Editorial: Microbial Electron Transport.FEMS microbiology ecology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Stefanie BeckerGeomicrobiology, Department of Geosciences, University of Tübingen, Schnarrenbergstrasse 94-96, 72076 Tübingen, Germany.ORCID 0009-0000-6909-797X
Thu Trang DangGeomicrobiology, Department of Geosciences, University of Tübingen, Schnarrenbergstrasse 94-96, 72076 Tübingen, Germany.
Ran WeiInstitute for Modelling Hydraulic and Environmental Systems (IWS), Department of Stochastic Simulation and Safety Research for Hydrosystems, University of Stuttgart, Pfaffenwaldring 5a, 70569 Stuttgart, Germany.
Andreas KapplerGeomicrobiology, Department of Geosciences, University of Tübingen, Schnarrenbergstrasse 94-96, 72076 Tübingen, Germany.

Funding

Deutsche Forschungsgemeinschaft 390838134Federal Ministry of Education and Research
6 · The paper itself

Abstract

The betaproteobacterium Thiobacillus denitrificans (ATCC 25259) oxidizes Fe(II) while reducing nitrate, yet its capacity for autotrophic growth as a nitrate-reducing Fe(II)-oxidizer remains uncertain. This study explored this capacity through cultivation experiments across multiple transfers, using growth medium with Fe(II) and nitrate as sole electron donor and acceptor, respectively. This setup necessitated nitrate reduction coupled to Fe(II) oxidation as the primary energy-yielding mechanism and Fe(II) as the exclusive electron donor for CO2 fixation and biomass production. Thiosulfate/nitrate pregrown T. denitrificans oxidized 42% of 10 mM Fe(II), reduced 54% of 3.5 mM nitrate, and accumulated 1.6 mM nitrite, but showed no cell growth. Subsequent transfers from this Fe(II)/nitrate culture to fresh medium with Fe(II) and nitrate showed no nitrate-reducing Fe(II) oxidation or population growth. While bacterial activity [Fe(II) oxidation, nitrate reduction] occurred in the first transfer from thiosulfate/nitrate to Fe(II)/nitrate, nitrite was produced, further reacting with Fe(II) abiotically (chemodenitrification). A kinetic model assessed enzymatic versus abiotic Fe(II) oxidation, revealing enzymatic oxidation accounted for twice as much (ca. 70%) as abiotic denitrification (ca. 30%) within 22 days. These findings suggest T. denitrificans performs the first step of denitrification with Fe(II) as an electron donor but does not achieve autotrophic growth under these conditions.

Indexed as

Ferrous CompoundsNitratesThiobacillusAutotrophic ProcessesBiomassNitritesOxidation-ReductionThiosulfatesFerrous CompoundsNitratesNitritesThiosulfateschemodenitrificationnitrate-reducing Fe(II) oxidationnitrate-reducing Fe(II)-oxidizerThiobacillus denitrificans

Identifiers

PMID40097297
PMCPMC11963766

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.