Evidence map›Paper›PMID 40093585›Full record

ArticleMedComm2025

A Single-Nucleus Transcriptomic Atlas Reveals Cellular and Genetic Characteristics of Alzheimer's-Like Pathology in Aging Tree Shrews.

Liu-Lin Xiong, Rong He, Ruo-Lan Du, Rui-Ze Niu, Lu-Lu Xue, Li Chen, Li-Ren Huangfu, Qiu-Xia Xiao, Jing Li, Yong-Ping Li and 4 more

Abstract read
In one paragraph

Article in MedComm, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Liu-Lin XiongDepartment of Anesthesiology The First People's Hospital of Zunyi (The Third Affiliated Hospital of Zunyi Medical University) Zunyi Guizhou China.ORCID https://orcid.org/0000-0002-1623-5969
Rong HeInstitute of Neuroscience Kunming Medical University Kunming Yunnan China.
Ruo-Lan DuDepartment of Anesthesiology The First People's Hospital of Zunyi (The Third Affiliated Hospital of Zunyi Medical University) Zunyi Guizhou China.
Rui-Ze NiuMental Health Center of Kunming Medical University Kunming Yunnan China.
Lu-Lu XueInstitute of Neurological Disease, National-Local Joint Engineering Research Center of Translational Medicine, State Key Lab of Biotherapy West China Hospital Sichuan University Chengdu Sichuan China.
Li ChenInstitute of Neurological Disease, National-Local Joint Engineering Research Center of Translational Medicine, State Key Lab of Biotherapy West China Hospital Sichuan University Chengdu Sichuan China.
Li-Ren HuangfuInstitute of Neuroscience Kunming Medical University Kunming Yunnan China.
Qiu-Xia XiaoDepartment of Anesthesiology The First People's Hospital of Zunyi (The Third Affiliated Hospital of Zunyi Medical University) Zunyi Guizhou China.
Jing LiInstitute of Neuroscience Kunming Medical University Kunming Yunnan China.
Yong-Ping LiInstitute of Neuroscience Kunming Medical University Kunming Yunnan China.
Si-Min ZhangYunnan Key Laboratory of Primate Biomedical Research, Institute of Primate Translational Medicine Kunming University of Science and Technology Kunming China.
Chang-Yin YuDepartment of Neurology Affiliated Hospital of Zunyi Medical University Zunyi Guizhou China.
Xiao-He TianDepartment of Anesthesiology The First People's Hospital of Zunyi (The Third Affiliated Hospital of Zunyi Medical University) Zunyi Guizhou China.
Ting-Hua WangDepartment of Anesthesiology The First People's Hospital of Zunyi (The Third Affiliated Hospital of Zunyi Medical University) Zunyi Guizhou China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The lack of natural aging-inducing Alzheimer's disease (AD) model presents a significant gap in the current preclinical research. Here, we identified a unique cohort of 10 naturally aging tree shrews (TSs) displaying distinct Alzheimer's-like pathology (ALP) from a population of 324, thereby establishing a novel model that closely mirrors human AD progression. Using single-nucleus RNA sequencing, we generated a comprehensive transcriptome atlas, revealing the cellular diversity and gene expression changes underlying AD pathology in aged TSs. Particularly, distinct differentiation trajectories of neural progenitor cells were highly associated with AD pathology. Intriguingly, cross-species comparisons among humans, TSs, monkeys, and mice highlighted a greater cellular homogeneity of TSs to primates and humans than to mice. Our extended cross-species analysis by including a direct comparison between human and TS hippocampal tissue under AD conditions uncovered conserved cell types, enriched synaptic biological processes, and elevated excitatory/inhibitory imbalance across species. Cell-cell communication analysis unveiled parallel patterns between AD human and ALP TSs, with both showing reduced interaction strength and quantity across most cell types. Overall, our study provides rich, high-resolution resources on the cellular and molecular landscape of the ALP TS hippocampus, reinforcing the utility of TSs as a robust model for AD research.

Indexed as

Alzheimer's‐like pathology, cross‐species analysis, Natural agingtree shrews, single‐nucleus transcriptomic atlas

Identifiers

PMID40093585
PMCPMC11910145

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.