Evidence map›Paper›PMID 40091026›Full record

ArticleBMC genomic data2025

Genome sequencing highlights the fungal sclerotium formation of medicinal fungi Polyporus umbellatus.

Li Chi, Tianrui Liu, Zhongyi Hua, Pengjie Han, Honghong Jiao, Yuan Yuan

Abstract read
In one paragraph

Article in BMC genomic data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Li Chi *School of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, 712046, China.
Tianrui Liu *Jiangxi Province Key Laboratory of Sustainable Utilization of Traditional Chinese Medicine Resources, Institute of Traditional Chinese Medicine Health Industry, China Academy of Chinese Medical Sciences, Nanchang, 330115, China.
Zhongyi HuaSchool of Pharmacy, Jiangsu University, Zhenjiang, 212013, China.
Pengjie HanShandong Engineering Research Center for Innovation and Application of General Technology for Separation of Natural Products, Shandong Analysis and Test Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan, 250014, China. hanpengjie2023@126.com.
Honghong JiaoSchool of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, 712046, China.
Yuan YuanSchool of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, 712046, China. y_yuan0732@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesPolyporus umbellatus is a well-known medicinal fungus in Asia. Due to its long growth cycle, wild resources of P. umbellatus are rapidly declining. Research on P. umbellatus growth is scarce, thereby impeding the investigation into the mechanism of sclerotium formation. In this study, the whole genome sequence of P. umbellatus was assembled and annotated. DATA DESCRIPTION: The generated genome was 79.74 Mb with an N50 of 969.73 Kbp, a GC content of 50.63%, encoding 10,864 protein-coding genes. Additionally, 82 ribosomal RNAs, 488 transfer RNAs, 25 small nuclear RNAs (snRNAs) and 741 micro RNA (miRNAs) were identified. This genomic resource will unveil molecular mechanisms of sclerotium formation and provides insight into the underlying molecular processes in medicinal fungi.

Indexed as

Genome, FungalPolyporusWhole Genome SequencingCAZymesFungal sclerotium formationPolyporus umbellatusWhole-genome sequencing

Identifiers

PMID40091026
PMCPMC11912782

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.