Evidence map›Paper›PMID 40087815›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2025

Citrullination of NF-κB p65 by PAD2 as a Novel Therapeutic Target for Modulating Macrophage Polarization in Acute Lung Injury.

Xin Yu, Yujing Song, Tao Dong, Wenlu Ouyang, Chao Quan, Liujiazi Shao, Leonard Barasa, Paul R Thompson, Mao Zhang, Jianjie Ma and 2 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. NEMO (IKKγ) citrullination in microglia promotes neuroinflammation in the post-ischemic brain.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xin YuDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.
Yujing SongDepartment of Mechanical and Aerospace Engineering, New York University Tandon School of Engineering, Brooklyn, NY, 11201, USA.ORCID https://orcid.org/0000-0003-1448-3069
Tao DongDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.
Wenlu OuyangDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.
Chao QuanDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.
Liujiazi ShaoDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.
Leonard BarasaProgram in Chemical Biology, Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA.
Paul R ThompsonProgram in Chemical Biology, Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA.
Mao ZhangDepartment of Emergency Medicine, Second Affiliated Hospital, Zhejiang University School of Medicine, No.88 Jiefang Road, Hangzhou, Zhejiang, 310009, China.
Jianjie MaDepartment of Surgery, Division of Surgical Science, University of Virginia, Charlottesville, VA, 22903, USA.
Katsuo KurabayashiDepartment of Mechanical and Aerospace Engineering, New York University Tandon School of Engineering, Brooklyn, NY, 11201, USA.ORCID https://orcid.org/0000-0002-9613-3590
Yongqing LiDepartment of Surgery, University of Michigan Health System, Ann Arbor, MI, 48109, USA.

Funding

University of Massachusetts Center for Clinical Science and Translational SupplementUL1TR001453 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2015 to 2024
$39.0M
Chemical probes to decipher PAD biologyR35GM118112 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Paul R Thompson · 2016 to 2026
$9.5M
Mitigating neuroinflammation and enhancing neuronal integrity in Alzheimer's diseaseR01AG072430 · NIA · UNIVERSITY OF VIRGINIA · PI Jianjie Ma · 2022 to 2026
$3.4M
MG53 function in muscle agingR01AG071676 · NIA · UNIVERSITY OF VIRGINIA · PI Jianjie Ma, Ki Ho Park · 2022 to 2026
$3.1M
Protein therapy to treat virus induced cardiopulmonary injuryR01HL157215 · NHLBI · UNIVERSITY OF VIRGINIA · PI CAI, CHUANXI, MA, JIANJIE · 2022 to 2025
$2.7M
PAD2 and CitH3 in Pathogenesis of Sepsis-induced ALIR01HL155116 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ALAM, HASAN B, LI, YONGQING · 2021 to 2024
$2.1M
Nanoplasmonic Spatiotemporal Imaging of Single-Cell Protein Secretion and Intercellular CommunicationR21GM151528 · NIGMS · NEW YORK UNIVERSITY · PI KURABAYASHI, KATSUO · 2023 to 2024
$448k
Center for Clinical and Translational Science, University of Massachusetts TR001453Joint Institute for Translational and Clinical Research U068874National Institutes of Health R01 R01HL155116National Institutes of Health R21 R21GM151528NCATS NIH HHS UL1 TR001453NHLBI NIH HHS R01 HL155116NHLBI NIH HHS R01 HL157215NIA NIH HHS R01 AG071676NIA NIH HHS R01 AG072430NIGMS NIH HHS R21 GM151528NIGMS NIH HHS R35 GM118112
6 · The paper itself

Abstract

Mediating protein citrullination, peptidyl arginine deiminase 2 (PAD2) has recently been reported to influence macrophage phenotypes. However, the mechanisms of PAD2 on macrophage function in Pseudomonas aeruginosa (PA)-induced acute lung injury syndrome (ALI) remains unclear. Utilizing single-cell RNA sequencing and mass spectrometry-based proteomics, a new citrullination site at arginine 171 (R171) is discovered within nuclear factor- κB (NF-κB) p65 catalyzed by PAD2, which modulates PAD2-NF-κB p65-importin α3 pathway and its downstream M1/M2 macrophage polarization. Building on these findings, a cell-specific targeted therapeutic strategy using gold nanoparticles (AuNPs) conjugated with a novel PAD2 inhibitor, AFM41a, and an intercellular adhesion molecule-1 (ICAM-1) antibody is developed. This approach enables the selective delivery of the inhibitor to M1-polarized macrophages in the PA-infected alveolar niche. In vivo, this nanomedicine reduces excessive inflammation and promotes M1-to-M2 polarization to inhibit ALI. This study highlights the role of PAD2-mediated citrullination in macrophage polarization and introduces a promising nanoparticle-based therapy for PA-induced ALI.

Indexed as

Acute Lung InjuryCitrullinationMacrophagesProtein-Arginine Deiminase Type 2Transcription Factor RelAAnimalsHumansMaleMiceMice, Inbred C57BLPseudomonas aeruginosaPseudomonas InfectionsProtein-Arginine Deiminase Type 2Transcription Factor RelAacute lung injurygold nanoparticlesICAM‐1macrophage polarizationNF‐κB p65PAD2

Identifiers

PMID40087815
PMCPMC12079445

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.