Evidence map›Paper›PMID 40087674›Full record

ArticleJournal of translational medicine2025

Multidimensional bioinformatics perspective on smoking-linked driver genes and immune regulatory mechanisms in non-small cell lung cancer.

Can Ouyang, Xiaopeng Yu, Huazhong Wang, Puhua Zeng

Abstract read
In one paragraph

Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Which dominates recurrence: tumor or microenvironment?Journal of translational medicine · 2025
    Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Can OuyangHunan Provincial Hospital of Integrated Traditional Chinese and Western Medicine, Changsha, Hunan, 410006, People's Republic of China.
Xiaopeng YuSchool of Integrated Chinese and Western Medicine, Hunan University of Chinese Medicine, Changsha, Hunan, 410208, People's Republic of China.
Huazhong WangHunan Provincial Hospital of Integrated Traditional Chinese and Western Medicine, Changsha, Hunan, 410006, People's Republic of China.
Puhua ZengHunan Provincial Hospital of Integrated Traditional Chinese and Western Medicine, Changsha, Hunan, 410006, People's Republic of China. zph120@126.com.

Funding

Key Project of Hunan Provincial Administration of Traditional Chinese Medicine A2023042Key Research and Development Program of Hunan Provincial 2023SK2057National Natural Science Foundation of China 82074425Natural Science Foundation of Hunan Provincial 2023JJ30361Natural Science Foundation of Hunan Provincial 2023JJ30364Science and Technology Innovative Research Team in Higher Educational Institutions of Hunan Province CX20230835
6 · The paper itself

Abstract

backgroundLung cancer, one of the leading causes of cancer-related morbidity and mortality worldwide, is strongly associated with smoking as its primary carcinogenic factor. However, despite the strong link between smoking and lung cancer, not all smokers develop the disease, suggesting that individual genetic susceptibility and molecular mechanisms may play a critical role in the onset of lung cancer. Understanding the gene-driving mechanisms and immune regulatory pathways involved in smoking-related lung cancer remains one of the key challenges in current lung cancer research.

methodsThis study employs an integrative bioinformatics approach to explore gene expression differences and immune microenvironment characteristics between smokers with non-small cell lung cancer (NSCLC) and normal individuals. First, smoking-linked lung cancer driver genes (SLDCGs) were identified, followed by Mendelian Randomization (MR) and Summary-based Mendelian Randomization (SMR) analyses to further validate their causal relationships. Next, public databases, including TCGA, GEO, and GTEx, were used to systematically analyze the expression differences of SLDCGs across various clinical subgroups, and immune infiltration analysis was conducted to explore their potential roles in the immune microenvironment of NSCLC.

resultsThe study identified HLA-J and PRMT7 as core driver genes for smoking-associated NSCLC. MR analysis confirmed the potential causal relationship of HLA-J and PRMT7 in the development of NSCLC. Specifically, high expression of PRMT7 was closely associated with the occurrence of NSCLC, while low expression of HLA-J was implicated in immune evasion mechanisms in NSCLC. Additionally, immune microenvironment analysis revealed that HLA-J enhances the activity of immune cells, particularly T cells, to promote tumor immune recognition, whereas PRMT7 suppresses immune cell function, weakening immune surveillance and facilitating immune evasion.

conclusionThis study systematically reveals the molecular mechanisms of smoking-linked NSCLC through multidimensional bioinformatics analysis, highlighting the key roles of SLDCGs in immune evasion. The discovery of HLA-J and PRMT7 provides new theoretical foundations for targeted immunotherapy, with significant potential for early diagnosis and personalized treatment of smoking-induced NSCLC. Future research should focus on validating these genes in clinical samples and exploring their potential in immunotherapy.

Indexed as

Carcinoma, Non-Small-Cell LungComputational BiologyLung NeoplasmsSmokingGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseHumansMendelian Randomization AnalysisTumor MicroenvironmentBioinformaticsImmune microenvironmentMendelian randomizationNon-Small cell lung CancerSmoking-Linked lung Cancer driver genes

Identifiers

PMID40087674
PMCPMC11908013

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.