Evidence map›Paper›PMID 40084126›Full record

ArticleBME frontiers2025

Graph-Based 3-Dimensional Spatial Gene Neighborhood Networks of Single Cells in Gels and Tissues.

Zhou Fang, Kelsey Krusen, Hannah Priest, Mingshuang Wang, Sungwoong Kim, Anirudh Sriram, Ashritha Yellanki, Ankur Singh, Edwin Horwitz, Ahmet F Coskun

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BME frontiers, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhou FangWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Kelsey KrusenWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Hannah PriestWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Mingshuang WangWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Sungwoong KimWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Anirudh SriramWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Ashritha YellankiWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Ankur SinghWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.
Edwin HorwitzDepartment of Pediatrics, Emory University School of Medicine, Atlanta, GA 30322, USA.
Ahmet F CoskunWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.ORCID https://orcid.org/0000-0002-5797-1524

Funding

Hydrogel-based Organoids of African-American Lymphomas to Study B Cell Receptor Pathway InhibitorsR01CA266052 · NCI · GEORGIA INSTITUTE OF TECHNOLOGY · PI JEAN L KOFF, Ankur Singh · 2022 to 2026
$2.7M
Hydrogel-based lymphoid tissues for generation of activated human B cells and delivery in vivoR01AI186314 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI Ankur Singh · 2024 to 2026
$2.3M
Hydrogel-Based Aged Immune Organoids to Study Epigenetics and Trajectory of B CellsR01AI181282 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI Ankur Singh · 2024 to 2026
$2.2M
Lymphoid Experimental Therapeutics Platform to Study Cooperative Signaling inHuman LymphomasR01CA238745 · NCI · GEORGIA INSTITUTE OF TECHNOLOGY · PI SINGH, ANKUR · 2020 to 2024
$2.2M
Dissecting subcellular and cellular organization by spatial molecular neighborhood networksR35GM151028 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI Ahmet F. Coskun · 2023 to 2026
$1.5M
NCI NIH HHS R01 CA238745NCI NIH HHS R01 CA266052NIAID NIH HHS R01 AI181282NIAID NIH HHS R01 AI186314NIGMS NIH HHS R35 GM151028
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID40084126
PMCPMC11906096

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.