Evidence map›Paper›PMID 40083807›Full record

ArticleNAR molecular medicine2025

Nucleotide level mapping of uracils in murine heavy chain switch regions shows correlation between uracilation and positions of switch junctions created during class-switch recombination.

Rukshana Mohamad-Ramshan, Ramin Sakhtemani, Yasha Butt, Michael S Lawrence, Ashok S Bhagwat

Abstract read
In one paragraph

Article in NAR molecular medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rukshana Mohamad-RamshanDepartment of Chemistry, Wayne State University, Detroit, MI 48202, United States.
Ramin SakhtemaniMassachusetts General Hospital Krantz Family Center for Cancer Research, Boston, MA 02129, United States.ORCID https://orcid.org/0000-0001-5342-9415
Yasha ButtDepartment of Chemistry, Wayne State University, Detroit, MI 48202, United States.
Michael S LawrenceMassachusetts General Hospital Krantz Family Center for Cancer Research, Boston, MA 02129, United States.ORCID https://orcid.org/0000-0002-1307-459X
Ashok S BhagwatDepartment of Chemistry, Wayne State University, Detroit, MI 48202, United States.ORCID https://orcid.org/0000-0003-1188-0579

Funding

Mechanisms of APOBEC3A-induced cancer evolution and cancer vulnerabilityR01CA262874 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI MICHAEL S LAWRENCE · 2024 to 2026
$1.6M
The Role of UNG2 Degradation in Antibody MaturationR21AI180183 · NIAID · WAYNE STATE UNIVERSITY · PI BHAGWAT, ASHOK S · 2024 to 2025
$443k
Mapping and Visualizing Uracils Created by AID/APOBEC Enzymes using UdgXR21AI144708 · NIAID · WAYNE STATE UNIVERSITY · PI BHAGWAT, ASHOK S · 2019 to 2020
$398k
Development of new technologies for high-sensitivity detection of a B-cell tumor marker in DNAR21CA252858 · NCI · WAYNE STATE UNIVERSITY · PI BHAGWAT, ASHOK S · 2021 to 2021
$365k
NCI NIH HHS R01 CA262874NCI NIH HHS R21 CA252858NIAID NIH HHS R21 AI144708NIAID NIH HHS R21 AI180183
6 · The paper itself

Abstract

Introduction of uracils in specific regions within immunoglobulin genes by the activation-induced deaminase (AID) promotes mutations and double-strand breaks (DSBs). Although uracils are repaired through multiple DNA repair pathways, previous work has used mutations or DSBs as proxies for uracils and not mapped the uracils directly. We mapped uracils in the Ig heavy chain gene,

Identifiers

PMID40083807
PMCPMC11897869

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.