Evidence map›Paper›PMID 40082829›Full record

ArticleBMC cancer2025

Single nucleotide polymorphisms in ovarian cancer impacting lipid metabolism and prognosis: an integrated TCGA database analysis.

Haoyu Wang, Tian Tu, Lijun Yin, Zhenfeng Liu, Hui Lu

Abstract read
In one paragraph

Article in BMC cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Haoyu WangZhejiang University School of Medicine, #866 Yuhangtang RoadZhejiang Province, Hangzhou, 3100058, People's Republic of China.
Tian TuPlastic & Cosmetic Center, College of Medicine, The First Affiliated Hospital, Zhejiang University, #79 Qingchun RoadZhejiang Province, Hangzhou, 310003, People's Republic of China.
Lijun YinDepartment of Gynaecology and Obstetrics, College of Medicine, The First Affiliated Hospital, Zhejiang University, Zhejiang Province, Hangzhou, 310003, People's Republic of China.
Zhenfeng LiuDepartment of Nuclear Medicine, The First Affiliated Hospital of Zhejiang University, #79 Qingchun Road, Hangzhou, 310003, China.
Hui LuDepartment of Orthopedics, College of Medicine, The First Affiliated Hospital, Zhejiang University, Zhejiang Province, Hangzhou, 310003, People's Republic of China. huilu@zju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ovarian cancer (OC) stands as a formidable adversary among women, remaining a leading cause of cancer-related mortality owing to its aggressive and invasive nature. Investigating prognostic markers intricately linked to OC's molecular pathogenesis represents a critical avenue for enhancing patient outcomes and survival prospects. In this comprehensive study, we embarked on a bioinformatics journey, leveraging the vast repository of single nucleotide polymorphism (SNP) data from OC patients available within the TCGA database. Our overarching goal was to unearth the genetic underpinnings of OC, shedding light on potential prognostic markers that could significantly impact clinical decision-making and patient care. Our meticulous analysis led to the discovery of five mutated genes-APOB, BRCA1, COL6A3, LRP1, and LRP1B-engaged in the intricate world of lipid metabolism. These genes, previously unexplored in the context of OC, emerged as prominent figures in our investigation, showcasing their potential roles in OC progression. The intricate interplay between lipid metabolism and cancer development has garnered considerable attention in recent years, and our findings underscore the relevance of these genes in the context of OC. To fortify our discoveries, we delved into the realm of survival analysis, a pivotal component of our investigation. The results yielded compelling evidence of significant correlations between patient survival and the expression levels of the aforementioned genes. This critical insight underscores the potential utility of these genes as prognostic markers, illuminating a path toward more personalized and effective approaches to patient care. Our study represents a multifaceted approach to unraveling the complex molecular pathogenesis of OC. By harnessing the power of high-throughput data mining, we uncovered genetic insights that may reshape our understanding of this formidable disease. We complemented these findings with advanced techniques such as RT-qPCR and Western blot, further dissecting the intricacies of OC's molecular landscape. This holistic approach not only deepens our understanding but also provides essential bioinformatics information that holds promise in assessing patient prognosis. In summary, our study represents a significant stride in the quest to decode the molecular intricacies of ovarian cancer. Our findings spotlight the potential prognostic significance of APOB, BRCA1, COL6A3, LRP1, and LRP1B, inviting further exploration into their roles in OC progression. Ultimately, our research carries the potential to shape the future of OC management, offering a glimpse into a more personalized and effective approach to patient care.

Indexed as

Biomarkers, TumorLipid MetabolismOvarian NeoplasmsPolymorphism, Single NucleotideBRCA1 ProteinComputational BiologyDatabases, GeneticFemaleHumansPrognosisReceptors, LDLBiomarkers, TumorBRCA1 ProteinLRP1B protein, humanReceptors, LDLLipid metabolismOvarian cancerPatient prognosisPrognostic markersSingle nucleotide polymorphism

Identifiers

PMID40082829
PMCPMC11907782

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.