Evidence map›Paper›PMID 40082720›Full record

ReviewNature protocols2025

Preparation, maintenance and propagation of synchronous cultures of photoactive Chlamydomonas cells.

Rodrigo E Catalan, Alexandros A Fragkopoulos, Antoine Girot, Maike Lorenz, Oliver Bäumchen

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature protocols, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Metabolic Profile ofPlants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Enhanced dispersion of active microswimmers in confined flows.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rodrigo E Catalan *Experimental Physics V, University of Bayreuth, Bayreuth, Germany.ORCID 0000-0002-4126-3240
Alexandros A Fragkopoulos *Experimental Physics V, University of Bayreuth, Bayreuth, Germany.ORCID 0000-0001-8089-6887
Antoine GirotExperimental Physics V, University of Bayreuth, Bayreuth, Germany.ORCID 0000-0001-7830-6112
Maike LorenzDepartment of Experimental Phycology and SAG Culture Collection of Algae, Georg-August-University Göttingen, Göttingen, Germany.ORCID 0000-0002-2277-3077
Oliver BäumchenExperimental Physics V, University of Bayreuth, Bayreuth, Germany. Oliver.Baeumchen@uni-bayreuth.de.ORCID 0000-0002-4879-0369

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The systematic cultivation of species of photosynthetically active 'green' microorganisms in research labs started in the 1940s. Among these microorganisms, Chlamydomonas represents a genus of green biciliated microalgae, of which Chlamydomonas reinhardtii has become the main describing species. For decades C. reinhardtii has been used as an established model organism in biology, including research areas such as molecular biology of eukaryotes, photosynthesis, light receptors, cell metabolism, the dynamics of microtubule assembly and protein transport along cilia. More recently, the use of suspensions of light-responsive living microorganisms has seen a major expansion from the life sciences to the biophysics, statistical physics, fluid dynamics and bioengineering communities. Studies that substantially advance the state of the art in these research areas require the reliable preparation and maintenance of viable, monodisperse and synchronous cell cultures. Although some technical aspects are shared with standard procedures in cell biology and microbiology, Chlamydomonas and its relatives are photosensitive and, simultaneously, motile, meaning this microorganism requires tailored cultivation protocols that are specific to this species. Here we provide guidance on which Chlamydomonas wild-type and mutant strains are suitable for specific experiments and provide detailed step-by-step procedures to measure culture synchronicity, growth rate of the population, average cell size and motility features. The reliable preparation of cell cultures may facilitate future interdisciplinary research using living suspensions of photoactive microorganisms.

Indexed as

Cell Culture TechniquesChlamydomonasChlamydomonas reinhardtiiLight

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.