Evidence map›Paper›PMID 40072681›Full record

ArticlePurinergic signalling2025

A step-by-step protocol based on data mining to explore purinergic signaling in glioblastoma.

Martina Bedeschi, Ankita Agrawal, Elena Adinolfi, Anna Tesei, Valerie Vouret-Craviari

Abstract read
In one paragraph

Article in Purinergic signalling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Martina BedeschiBiosciences Laboratory, IRCCS Istituto Romagnolo Per Lo Studio Dei Tumori (IRST) Dino Amadori, 47014, Meldola, Italy.
Ankita AgrawalTranslational Research Centre, Rigshospitalet, Glostrup, Denmark.
Elena AdinolfiDepartment of Medical Sciences, Section of Experimental Medicine, University of Ferrara, Via Luigi Borsari 46, 44121, Ferrara, Italy.
Anna TeseiBiosciences Laboratory, IRCCS Istituto Romagnolo Per Lo Studio Dei Tumori (IRST) Dino Amadori, 47014, Meldola, Italy. anna.tesei@irst.emr.it.
Valerie Vouret-CraviariUniversité Côte dAzur, CNRS, INSERM, IRCAN, Nice, France.

Funding

European Cooperation in Science and Technology COST Action CA21130Ministero della Salute ERP-2021-23682413
6 · The paper itself

Abstract

Over the past few years, transcriptomics has emerged as a pillar for modern scientific research, enabling the comprehensive profiling of gene expression. The availability of large-scale public datasets, such as NCBI Gene Expression Omnibus, International Cancer Genome Consortium, and The Cancer Genome Atlas, has significantly boosted many scientific discoveries. However, to analyze and interpret these vast datasets, sophisticated bioinformatic tools are often necessary. Phantasus is a user-friendly web application designed to streamline gene expression analysis. By integrating data loading, normalization, filtering, enrichment pathways analysis, and principal component analysis, Phantasus enables researchers to promptly investigate and evaluate complex gene expression patterns. This tool simplifies the identification of differentially expressed genes and the discovery of novel biological insights. Here, we demonstrate how Phantasus can be utilized for gene expression analysis in glioblastoma (GBM), the most common primary malignant brain tumour in adults. Specifically, we focus on the role of purinergic signaling, with particular emphasis on the P2RX7 mRNA coding for the P2X7 receptor (P2RX7). To illustrate our proposal, we analyzed the expression of genes related to purinergic signaling in GBM patients stratified by high and low levels of P2RX7 expression. By harnessing Phantasus, researchers can further explore and navigate the nuances of gene regulation and its impact on human health and diseases.

Indexed as

Brain NeoplasmsData MiningGlioblastomaReceptors, Purinergic P2X7Signal TransductionGene Expression ProfilingHumansReceptors, Purinergic P2X7GlioblastomaP2X7 receptorPhantasus

Identifiers

PMID40072681
PMCPMC12595216

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.