Evidence map›Paper›PMID 40072562›Full record

ArticlePlant cell reports2025

Genome-wide identification of the SmPHR gene family in Salvia miltiorrhiza and SmPHR7-mediated response to phosphate starvation in Arabidopsis thaliana.

Xinxin Wang, Renjun Qu, Shiwei Wang, Jiaming Peng, Juan Guo, Guanghong Cui, Tong Chen, Meilan Chen, Ye Shen

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Article in Plant cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2025
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xinxin WangState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Renjun QuSchool of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, 310053, People's Republic of China.
Shiwei WangState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Jiaming PengState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Juan GuoState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Guanghong CuiState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Tong ChenState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Meilan ChenState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China.
Ye ShenState Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, People's Republic of China. shenye@nrc.ac.cn.ORCID http://orcid.org/0000-0003-0874-4285

Funding

earmarked found CARS-2012the National Key Research and Development Program of China 2023YFC3503900the National Natural Science Foundation of China 82173931the Scientific and Technological Innovation Project of China Academy of Chinese Medical Sciences CI2021A04102
6 · The paper itself

Abstract

key messageThis study reveals the transcripts of S. miltiorrhiza in response to phosphate deficiency, identifies 18 SmPHRs in the genome, and tentatively establishes a role for SmPHR7 in regulating phosphate starvation. Phosphorus is essential for plant growth and development, and phosphate deficiency is a common nutritional stress. Salvia miltiorrhiza (Danshen) is a traditional Chinese herb whose main active medicinal secondary metabolite is used in the treatment of heart disease. However, the physiological and molecular effects of phosphate starvation in S. miltiorrhiza have not been well studied. Here, we first investigated the effect of phosphate starvation on the growth and major medicinal compounds. Biomass decreased with lower phosphate concentrations, while the accumulation of compounds varied in S. miltiorrhiza. Transcriptome analysis showed that phosphate starvation affected the expression of genes involved in processes such as glycolysis/gluconeogenesis, glycerolipid metabolism, and phenylpropanoid biosynthesis. Phosphate starvation response (PHR) transcription factors play an important role in the phosphate starvation response, and we identified 18 PHR family genes in S. miltiorrhiza, distributed across 8 chromosomes. The expression levels of different SmPHR family members in roots and shoots differ in response to phosphate starvation. SmPHR7, which is highly expressed in response to phosphate starvations, was selected for further functional characterization. SmPHR7 has transcriptional activation activity and is localized in the nucleus. Furthermore, the expression of SmPHR7 in the Arabidopsis thaliana mutant phr (SmPHR7-OX) is shown to partially rescue the phosphate starvation phenotype. The expression of the Pi starvation-induced (PSI) gene in SmPHR7-OX showed a significant induction compared to the phr mutant under phosphate starvation. The identification of the SmPHR gene family significantly contributes to a broader understanding of phosphate starvation signaling in S. miltiorrhiza.

Indexed as

ArabidopsisArabidopsis ProteinsPhosphatesPlant ProteinsSalvia miltiorrhizaGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantMultigene FamilyPlant RootsTranscription FactorsArabidopsis ProteinsPhosphatesPlant ProteinsTranscription FactorsPhosphate starvationPHR gene familySalvia miltiorrhizaSmPHR7Transcriptome analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.