Evidence map›Paper›PMID 40070055›Full record

ArticleEnvironmental microbiology2025

Distinct Patterns of Antibiotic Sensitivities in Ammonia-Oxidising Archaea.

Timothy Klein, Logan H Hodgskiss, Max Dreer, J Colin Murrell, Matthew I Hutchings, Christa Schleper, Laura E Lehtovirta-Morley

Abstract read
In one paragraph

Article in Environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Timothy KleinSchool of Biological Sciences, University of East Anglia, Norwich, UK.
Logan H HodgskissDepartment of Functional and Evolutionary Ecology, Archaea Biology and Ecogenomics Unit, University of Vienna, Vienna, Austria.
Max DreerDepartment of Functional and Evolutionary Ecology, Archaea Biology and Ecogenomics Unit, University of Vienna, Vienna, Austria.
J Colin MurrellSchool of Environmental Sciences, University of East Anglia, Norwich, UK.
Matthew I HutchingsDepartment of Molecular Microbiology, John Innes Centre, Norwich, UK.
Christa SchleperDepartment of Functional and Evolutionary Ecology, Archaea Biology and Ecogenomics Unit, University of Vienna, Vienna, Austria.
Laura E Lehtovirta-MorleySchool of Biological Sciences, University of East Anglia, Norwich, UK.ORCID https://orcid.org/0000-0003-3256-0216

Funding

Austrian Science Fund W1257European Research Council UNITY 852993HORIZON EUROPE European Research Council ActionR 101079299Natural Environment Research Council NE/S007334/1Royal Society DH150187
6 · The paper itself

Abstract

Ammonia-oxidising archaea (AOA) are important microorganisms contributing towards the nitrogen flux in the environment. Unlike archaea from other major phyla, genetic tools are yet to be developed for the AOA, and identification of antibiotic resistance markers for selecting mutants is required for a genetic system. The aim of this study was to test the effects of selected antibiotics (hygromycin B, neomycin, apramycin, puromycin, novobiocin) on pure cultures of three well studied AOA strains, 'Candidatus Nitrosocosmicus franklandianus C13', Nitrososphaera viennensis EN76 and Nitrosopumilus maritimus SCM1. Puromycin, hygromycin B and neomycin inhibited some but not all tested archaeal strains. All strains were resistant to apramycin and inhibited by novobiocin to various degrees. As N. viennensis EN76 was relatively more resistant to the tested antibiotics, a wider range of concentrations and compounds (chloramphenicol, trimethoprim, statins) was tested against this strain. N. viennensis EN76 was inhibited by trimethoprim, but not by chloramphenicol, and growth recovered within days in the presence of simvastatin, suggesting either degradation of, or spontaneous resistance against, this compound. This study highlights the physiological differences between different genera of AOA and has identified new candidate antibiotics for selective enrichment and the development of selectable markers for genetic systems in AOA.

Indexed as

AmmoniaAnti-Bacterial AgentsArchaeaMicrobial Sensitivity TestsOxidation-ReductionAmmoniaAnti-Bacterial Agentsammonia‐oxidising archaeaantibioticsgenetic systeminhibitionselective enrichment

Identifiers

PMID40070055
PMCPMC11897584

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.