Evidence map›Paper›PMID 40067879›Full record

ArticleeLife2025

Translatome analysis reveals cellular network in DLK-dependent hippocampal glutamatergic neuron degeneration.

Erin M Ritchie, Dilan Acar, Siming Zhong, Qianyi Pu, Yunbo Li, Binhai Zheng, Yishi Jin

Abstract read
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Protein kinases as therapeutic targets in Alzheimer's disease: challenges, insights, and new frontiers.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2026
    Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Erin M RitchieDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.ORCID https://orcid.org/0000-0002-3558-3029
Dilan AcarDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.
Siming ZhongDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.
Qianyi PuDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.
Yunbo LiDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.
Binhai ZhengDepartment of Neurosciences, School of Medicine, University of California San Diego, La Jolla, United States.
Yishi JinDepartment of Neurobiology, School of Biological Sciences, University of California San Diego, La Jolla, United States.ORCID https://orcid.org/0000-0002-9371-9860

Funding

Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
Kavli Institute for Brain and Mind, University of California, San Diego 2020-1711NIH HHS S10 OD026929NINDS NIH HHS R35 127314TÜBİTAK 2214-A
6 · The paper itself

Abstract

The conserved MAP3K12/Dual Leucine Zipper Kinase (DLK) plays versatile roles in neuronal development, axon injury and stress responses, and neurodegeneration, depending on cell-type and cellular contexts. Emerging evidence implicates abnormal DLK signaling in several neurodegenerative diseases. However, our understanding of the DLK-dependent gene network in the central nervous system remains limited. Here, we investigated the roles of DLK in hippocampal glutamatergic neurons using conditional knockout and induced overexpression mice. We found that dorsal CA1 and dentate gyrus neurons are vulnerable to elevated expression of DLK, while CA3 neurons appear less vulnerable. We identified the DLK-dependent translatome that includes conserved molecular signatures and displays cell-type specificity. Increasing DLK signaling is associated with disruptions to microtubules, potentially involving STMN4. Additionally, primary cultured hippocampal neurons expressing different levels of DLK show altered neurite outgrowth, axon specification, and synapse formation. The identification of translational targets of DLK in hippocampal glutamatergic neurons has relevance to our understanding of selective neuron vulnerability under stress and pathological conditions.

Indexed as

HippocampusMAP Kinase Kinase KinasesNerve DegenerationNeuronsAnimalsGlutamic AcidMiceMice, KnockoutSignal TransductionGlutamic AcidMAP Kinase Kinase Kinasesmitogen-activated protein kinase kinase kinase 12c-Junhippocampusmicrotubulesmouseneuron degenerationneuroscienceRiboTag profilingstathmin

Identifiers

PMID40067879
PMCPMC11896613

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.