Evidence map›Paper›PMID 40065355›Full record

ArticleBiology direct2025

Differential growth and flowering capacity of tulip bulbs and the potential involvement of PHOSPHATIDYLETHANOLAMINE-BINDING PROTEINS (PEBPs).

Francesca Bellinazzo, Irene Manders, Bas Heidemann, Manuel Aguirre Bolanos, Evelien Stouten, Jacqueline Busscher, Dolores Abarca, Froukje van der Wal, Marcelo Carnier Dornelas, Gerco C Angenent and 3 more

Abstract read
In one paragraph

Article in Biology direct, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Francesca BellinazzoLaboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Irene MandersLaboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Bas HeidemannLaboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Manuel Aguirre BolanosTranslational Plant Biology, Department of Biology, Science4Life, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Evelien StoutenPlant Stress Resilience, Department of Biology, Science4Life, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Jacqueline BusscherBioscience, Wageningen Plant Research, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Dolores AbarcaTranslational Plant Biology, Department of Biology, Science4Life, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Froukje van der WalBioscience, Wageningen Plant Research, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Marcelo Carnier DornelasDepartamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, SP, CEP 13083-862, Brazil.
Gerco C AngenentLaboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands.
Marcel ProveniersTranslational Plant Biology, Department of Biology, Science4Life, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.
Harm NijveenBioinformatics Group, Wageningen University and Research, PO Box 633, 6700 AP, Wageningen, The Netherlands.
Richard G H ImminkLaboratory of Molecular Biology, Cluster Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, The Netherlands. richard.immink@wur.nl.

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek ALWGR.2017.008
6 · The paper itself

Abstract

backgroundTulipa gesneriana reproduces vegetatively by the development of bulb clusters from axillary meristems in the scales of a mother bulb. While part of the daughter bulbs in a cluster develop into large, flowering bulbs, others stay small and vegetative under the same environmental conditions. This study aims to investigate how these different developmental fates are orchestrated.

resultsRNA-seq analysis revealed that the overall transcriptomic landscape of the two types of daughter bulbs does not differ substantially, but follows a similar trajectory over time. Nonetheless, the expression levels of genes related to proliferation already differ at early development stages. Surprisingly, at a later stage, transcriptomic changes related to flower induction are detectable in flowering as well as non-flowering bulbs, with some quantitative differences. However, genes linked with floral organ development are differentially expressed, as well as negative regulators of flowering and more basal metabolic processes. In search for the molecular determinants of daughter bulb size and developmental fate, we investigated members of the PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN (PEBP) gene family as candidates. Tulip FLOWERING LOCUS T1 (TgFT1), TgFT2, and TgFT3 are expressed in leaves and leaf-like organs of the mother plant, and their encoded proteins interact with the TCP transcription factor TEOSINTE BRANCHED1 (TgTB1). Therefore, we suggest that these three genes act as 'bulbigens', meaning regulators of axillary meristem outgrowth and hence, daughter bulb size. Furthermore, we found that TgFT2 and TgFT4 could constitute the main florigens in tulips, because of their expression pattern and the binding of their encoding proteins to the bZIP transcription factor FD (TgFD). Moreover, Arabidopsis lines ectopically expressing TgFT2 or TgFT4 flower significantly earlier than the wild type.

conclusionsDifferences in the developmental fate of tulip daughter bulbs are established early during development and are linked with differences in cell division and metabolism. The activity of members of the PEBP family, known for their role in flowering and storage organ formation in geophytes, appeared to be associated with the transcriptional switches observed during daughter bulb development. This points towards a functional role of these proteins in governing developmental trajectories underlying the mode of reproduction.

Indexed as

FlowersPhosphatidylethanolamine Binding ProteinPlant ProteinsTulipaGene Expression Regulation, PlantMeristemPlant RootsTranscriptomePhosphatidylethanolamine Binding ProteinPlant ProteinsBulbingDormancyFloweringPEBP genesReproductionTranscriptional regulationTulip

Identifiers

PMID40065355
PMCPMC11895272

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.