Evidence map›Paper›PMID 40063977›Full record

ArticleThe journal of physical chemistry. B2025

Combined Mutational and Spectroscopic Study on the Calcium-Related Kinetic Effects on the VirChR1 Photocycle.

Gerrit H U Lamm, Dmitrii Zabelskii, Taras Balandin, Valentin Gordeliy, Josef Wachtveitl

Abstract read
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Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Gerrit H U LammInstitute of Physical and Theoretical Chemistry, Goethe University Frankfurt, 60438 Frankfurt Am Main, Germany.ORCID 0009-0006-6743-2344
Dmitrii ZabelskiiEuropean XFEL, 22869 Schenefeld, Germany.
Taras BalandinInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, 52428 Jülich, Germany.
Valentin GordeliyInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, 52428 Jülich, Germany.ORCID 0000-0001-5955-900X
Josef WachtveitlInstitute of Physical and Theoretical Chemistry, Goethe University Frankfurt, 60438 Frankfurt Am Main, Germany.ORCID 0000-0002-8496-8240

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The viral rhodopsin 1 subfamily consists of microbial rhodopsins, such as VirChR1, with a light-gated cation channeling functionality, which is inhibited by calcium. For VirChR1, S14, E54, and N225 have been proposed as key residues for calcium binding. They form a highly conserved SEN-triad in channelrhodopsins near the functionally important central gate. Here, we present a time-resolved UV/vis spectroscopic study on the VirChR1 variants S14A, E54A, and N225A in a calcium-dependent manner. Comparison with the calcium-associated effects observed for the wild type shed light on the role of the respective residues for the calcium interaction. While S14A shows less pronounced, yet similar, signals, indicative of a reduced calcium affinity, E54A exhibits nearly calcium-independent photocycle kinetics, highlighting its crucial role for calcium binding. The N225A variant shows altered photocycle kinetics, in both the absence and presence of calcium, demonstrating its critical role in the formation of the functionally important central gate in VirChR1.

Indexed as

CalciumRhodopsins, MicrobialKineticsMutationSpectrophotometry, UltravioletCalciumRhodopsins, Microbial

Identifiers

PMID40063977
PMCPMC11931529

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.