Evidence map›Paper›PMID 40063838›Full record

ArticleGlycobiology2025

Charge matters: how flanking substrate charge modulates O-glycan Core elongation.

Collin J Ballard, Matthew R Smutny, Lam D Chau, Collin K Wong, Haley M Aharoni, Hana K Lee, Digantkumar G Chapla, Ramon Hurtado-Guerrero, Kelley W Moremen, Thomas A Gerken

Abstract read
In one paragraph

Article in Glycobiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Collin J BallardDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0000-0003-2869-6970
Matthew R SmutnyDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0009-0006-7111-8331
Lam D ChauDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0000-0002-1215-087X
Collin K WongDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0009-0004-1818-9806
Haley M AharoniDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0009-0009-8038-3438
Hana K LeeDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0009-0004-0465-659X
Digantkumar G ChaplaComplex Carbohydrate Research Center, University of Georgia, 315 Riverbend Rd., Athens, Georgia 30602, United States.ORCID 0000-0003-0649-1368
Ramon Hurtado-GuerreroThe Institute for Biocomputation and Physics of Complex Systems (BIFI), University of Zaragoza, Mariano Esquillor s/n, Campus Rio Ebro, Edificio I+D, Zaragoza 50018, Spain.
Kelley W MoremenComplex Carbohydrate Research Center, University of Georgia, 315 Riverbend Rd., Athens, Georgia 30602, United States.ORCID 0000-0003-1768-582X
Thomas A GerkenDepartment of Biochemistry, Case Western Reserve University, 2109 Adelbert Rd, Cleveland, OH 44106, United States.ORCID 0000-0002-7919-7613

Funding

Initiation and Regulation of Mucin-Type O-GlycosylationR01GM113534 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI GERKEN, THOMAS A · 2018 to 2023
$1.6M
ARAID, MEC PID2022-136362NB-I00Gobierno de Aragón LMP58_18NIGMS NIH HHS R01 GM113534NIH HHS P01-GM107012
6 · The paper itself

Abstract

Mucin type O-glycan core elongation is typically performed by the C1GALT1, B3GNT6, and ST6GalNAc-I/-II O-glycosyltransferases. These enzymes target the Tn antigen (GalNAc-O-Thr/Ser) dictating the fate of O-glycan elongation, playing important roles in health and disease. Changes in transferase expression and glycan structure are commonly associated with diseases such as cancer, Tn-syndrome, and ulcerative colitis. Despite their significance, their substrate specificities and their biological roles remain elusive. Here, we examine the roles of flanking glycopeptide substrate charge using a library of differently charged glycopeptides and a small library of PSGL-1 Thr57 based charged glycopeptides. We found that C1GALT1 was most influenced by flanking charge preferring negatively charged substrates, while B3GNT6 and ST6GalNAc-II were less influenced, showing unique N- and C-terminal charge preferences. Interestingly, ST6GalNAc-I was not influenced by flanking charge. These charge specificities were further maintained against the charged PSGL-1 glycopeptides, although ST6GalNAc-I showed an increased preference towards a remote N-terminal positive charge. The observed charge preferences were to a large part driven by substrate interactions with the electrostatic surface of the transferase. We propose that negative flanking charge may assist C1GALT1 in targeting key glycosites such as in PSGL-1 and podoplanin. Our findings are consistent with a Golgi hierarchy, where the cis-Golgi localized GalNAc-Ts and C1GALT1 determine the site and thus fate of glycosylation, while the trans-Golgi less-specific ST6GalNAc-I provides a final capping function. This characterization of substrate charge preference furthers our understanding of how these enzymes select their substrates and may contribute to our understanding of their biological roles.

Indexed as

GlycopeptidesPolysaccharidesAntigens, Tumor-Associated, CarbohydrateGalactosyltransferasesHumansMembrane GlycoproteinsSubstrate SpecificityAntigens, Tumor-Associated, CarbohydrateGalactosyltransferasesGlycopeptidesMembrane GlycoproteinsPolysaccharidesTn antigenCore glycosyltransferases/electrostatic interactions/GalNAc-T/Golgi/O-glycan elongation

Identifiers

PMID40063838
PMCPMC11943483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.