Evidence map›Paper›PMID 40063614›Full record

ArticlePloS one2025

Genome-wide association analysis of Septoria tritici blotch for adult plant resistance in elite bread wheat (Triticum aestivum L) genotypes.

Molla Mekonnen Kassie, Tiegist Dejene Abebe, Ermias Abate Desta, Wuletaw Tadesse

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Harnessing artificial intelligence in plant breeding: innovations in digital phenotyping and breeding methodologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Molla Mekonnen KassieBahir Dar University, College of Agriculture and Environmental Sciences, Bahir Dar, Ethiopia.ORCID 0000-0002-5921-6338
Tiegist Dejene AbebeBahir Dar University, College of Agriculture and Environmental Sciences, Bahir Dar, Ethiopia.
Ermias Abate DestaSasakawa Africa Association (SAA), Addis Ababa, Ethiopia.
Wuletaw TadesseInternational Center for Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Septoria tritici blotch (STB) is a predominant foliar disease of wheat, caused by the pathogen Zymoseptoria tritici. This disease can lead to substantial yield losses warranting control by using expensive fungicides. One effective method of STB control is the utilization of resistant wheat varieties. In this particular study, a panel comprising of 186 bread wheat genotypes was assessed for their adult plant resistance (APR) to STB. Field trials were conducted across five environments in Ethiopia during the 2022 and 2023 growing seasons under natural infestation conditions. The association panel was genotyped using 20K single nucleotide polymorphism (SNP) markers. To determine the relationship between genetic markers and STB resistance, a mixed linear model (MLM) analysis was performed using the statgen GWAS R software package. Heritability estimates for STB resistance ranged from 0.39 to 0.95, underscoring the genetic variability and the potential for selection. The study identified 52 marker-trait associations (MTAs) for STB resistance at maturity (SDSM) and 62 MTAs at heading (SDSH). Chromosome 5A contains a high concentration of MTAs that confer resistance to STB, hosting multiple significant MTAs, including four consistently associated markers ('Kukri_c10033_724', 'RAC875_rep_c116420_103', 'TG0019', and 'RAC875_c30566_230'). Additionally, chromosomes 1B, 2B, 5B, and 7A were found to harbor important MTAs, contributing to resistance across various environments. Notably, two QTLs, qtSTB23 (5A) and qtSTB38 (7B), exhibited stability across multiple environments, making them robust candidates for breeding programs. Furthermore, novel resistance loci on chromosome 2A were discovered, offering new opportunities for enhancing resistance. Therefore, these findings provide an opportunity for improving STB resistance through gene stacking using marker-assisted selection (MAS).

Indexed as

AscomycotaDisease ResistancePlant DiseasesTriticumChromosomes, PlantGenes, PlantGenetic LociGenome-Wide Association StudyPlant BreedingPolymorphism, Single NucleotideSelection, Genetic

Identifiers

PMID40063614
PMCPMC11892845

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.