Evidence map›Paper›PMID 40063605›Full record

ArticleJournal of experimental botany2025

A monomer-dimer switch modulates the activity of plant adenosine kinase.

David Jaroslav Kopečný, Armelle Vigouroux, Jakub Bělíček, Martina Kopečná, Radka Končitíková, Jaroslava Friedecká, Václav Mik, Klára Supíková, Jan František Humplík, Marine Le Berre and 6 more

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

David Jaroslav KopečnýDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-3379-7058
Armelle VigourouxUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91198 Gif-sur-Yvette, France.ORCID 0000-0003-3531-5320
Jakub BělíčekDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-9538-7054
Martina KopečnáDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0003-2136-4615
Radka KončitíkováDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-4398-8982
Jaroslava FriedeckáLaboratory of Growth Regulators, Faculty of Science, Palacký University & Institute of Experimental Botany of the Czech Academy of Sciences, Olomouc CZ-77900, Czech Republic.
Václav MikDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-8515-3035
Klára SupíkováDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-8689-1910
Jan František HumplíkDepartment of Chemical Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-8915-4369
Marine Le BerreUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91198 Gif-sur-Yvette, France.
Stephan PlancqueelUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91198 Gif-sur-Yvette, France.
Miroslav StrnadLaboratory of Growth Regulators, Faculty of Science, Palacký University & Institute of Experimental Botany of the Czech Academy of Sciences, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-2806-794X
Klaus von SchwartzenbergInstitute for Plant Science and Microbiology, Universität Hamburg, D-22609 Hamburg, Germany.ORCID 0000-0002-2273-9960
Ondřej NovákLaboratory of Growth Regulators, Faculty of Science, Palacký University & Institute of Experimental Botany of the Czech Academy of Sciences, Olomouc CZ-77900, Czech Republic.ORCID 0000-0003-3452-0154
Solange MoréraUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), F-91198 Gif-sur-Yvette, France.ORCID 0000-0001-7781-0448
David KopečnýDepartment of Experimental Biology, Faculty of Science, Palacký University, Olomouc CZ-77900, Czech Republic.ORCID 0000-0002-4309-4284

Funding

Czech Science Foundation IGA_PrF_2023_012Czech Science Foundation IGA_PrF_2025_011
6 · The paper itself

Abstract

Adenosine undergoes ATP-dependent phosphorylation catalyzed by adenosine kinase (ADK). In plants, ADK also phosphorylates cytokinin ribosides, transport forms of the hormone. Here, we investigated the substrate preferences, oligomeric states, and structures of ADKs from moss (Physcomitrella patens) and maize (Zea mays) alongside metabolomic and phenotypic analyses. We showed that dexamethasone-inducible ZmADK overexpressor lines in Arabidopsis can benefit from a higher number of lateral roots and larger root areas under nitrogen starvation. We discovered that maize and moss enzymes can form dimers upon increasing protein concentration, setting them apart from the monomeric human and protozoal ADKs. Structural and kinetic analyses revealed a catalytically inactive unique dimer. Within the dimer, both active sites are mutually blocked. The activity of moss ADKs, exhibiting a higher propensity to dimerize, was 10-fold lower compared with maize ADKs. Two monomeric structures in a ternary complex highlight the characteristic transition from an open to a closed state upon substrate binding. This suggests that the oligomeric state switch can modulate the activity of moss ADKs and probably other plant ADKs. Moreover, dimer association represents a novel negative feedback mechanism, helping to maintain steady levels of adenosine and AMP.

Indexed as

Adenosine KinaseBryopsidaPlant ProteinsZea maysArabidopsisProtein MultimerizationSubstrate SpecificityAdenosine KinasePlant ProteinsAdenosine kinasecrystal structurecytokininoverexpressionPhyscomitrella patenspurineribosideSnRKZea mays

Identifiers

PMID40063605
PMCPMC12369479

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.