Evidence map›Paper›PMID 40063081›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2025

Application of unified health large language model evaluation framework to In-Basket message replies: bridging qualitative and quantitative assessments.

Chuan Hong, Anand Chowdhury, Anthony D Sorrentino, Haoyuan Wang, Monica Agrawal, Armando Bedoya, Sophia Bessias, Nicoleta J Economou-Zavlanos, Ian Wong, Christian Pean and 4 more

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. MedFactEval and MedAgentBrief: A Framework and Workflow for Generating and Evaluating Factual Clinical Summaries.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2026
    Article
  5. Article
  6. Article
  7. Advancing the application and evaluation of large language models in health and biomedicine.Journal of the American Medical Informatics Association : JAMIA · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Chuan HongDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0000-0001-7056-9559
Anand ChowdhuryDepartment of Medicine, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0000-0001-5703-113X
Anthony D SorrentinoDepartment of Medicine, Duke University School of Medicine, Durham, NC 27710, United States.
Haoyuan WangDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.
Monica AgrawalDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.
Armando BedoyaDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0000-0001-6496-7024
Sophia BessiasDuke Clinical and Translational Science Institute, Duke University School of Medicine, Durham, NC 27710, United States.
Nicoleta J Economou-ZavlanosDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0009-0000-4078-9809
Ian WongDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.
Christian PeanDepartment of Medicine, Duke University School of Medicine, Durham, NC 27710, United States.
Fan LiDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.
Kathryn I PollakCancer Prevention and Control Research Program, Duke Cancer Institute, Durham, NC 27710, United States.ORCID 0000-0002-5559-2416
Eric G PoonDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0000-0002-7251-5842
Michael J PencinaDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC 27710, United States.ORCID 0000-0001-5798-8855

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesLarge language models (LLMs) are increasingly utilized in healthcare, transforming medical practice through advanced language processing capabilities. However, the evaluation of LLMs predominantly relies on human qualitative assessment, which is time-consuming, resource-intensive, and may be subject to variability and bias. There is a pressing need for quantitative metrics to enable scalable, objective, and efficient evaluation. MATERIALS AND

methodsWe propose a unified evaluation framework that bridges qualitative and quantitative methods to assess LLM performance in healthcare settings. This framework maps evaluation aspects-such as linguistic quality, efficiency, content integrity, trustworthiness, and usefulness-to both qualitative assessments and quantitative metrics. We apply our approach to empirically evaluate the Epic In-Basket feature, which uses LLM to generate patient message replies.

resultsThe empirical evaluation demonstrates that while Artificial Intelligence (AI)-generated replies exhibit high fluency, clarity, and minimal toxicity, they face challenges with coherence and completeness. Clinicians' manual decision to use AI-generated drafts correlates strongly with quantitative metrics, suggesting that quantitative metrics have the potential to reduce human effort in the evaluation process and make it more scalable. DISCUSSION: Our study highlights the potential of a unified evaluation framework that integrates qualitative and quantitative methods, enabling scalable and systematic assessments of LLMs in healthcare. Automated metrics streamline evaluation and monitoring processes, but their effective use depends on alignment with human judgment, particularly for aspects requiring contextual interpretation. As LLM applications expand, refining evaluation strategies and fostering interdisciplinary collaboration will be critical to maintaining high standards of accuracy, ethics, and regulatory compliance.

conclusionOur unified evaluation framework bridges the gap between qualitative human assessments and automated quantitative metrics, enhancing the reliability and scalability of LLM evaluations in healthcare. While automated quantitative evaluations are not ready to fully replace qualitative human evaluations, they can be used to enhance the process and, with relevant benchmarks derived from the unified framework proposed here, they can be applied to LLM monitoring and evaluation of updated versions of the original technology evaluated using qualitative human standards.

Indexed as

Artificial IntelligenceNatural Language ProcessingUnified Medical Language SystemHumansLarge Language Modelsgenerative AIhealthcarelarge language modelqualitative evaluationquantitative evaluation

Identifiers

PMID40063081
PMCPMC12005619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.