Evidence map›Paper›PMID 40063072›Full record

ArticleJournal of medical Internet research2025

Risk Stratification in Immunoglobulin A Nephropathy Using Network Biomarkers: Development and Validation Study.

Jiaxing Tan, Rongxin Yang, Liyin Xiao, Lingqiu Dong, Zhengxia Zhong, Ling Zhou, Wei Qin

Abstract readMulticenter StudyValidation Study
In one paragraph

Article in Journal of medical Internet research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jiaxing Tan *Division of Nephrology, Department of Medicine, West China Hospital of Sichuan University, Chengdu, China.ORCID https://orcid.org/0000-0003-4585-4926
Rongxin Yang *College of Computer Science, Sichuan University, Chengdu, China.ORCID https://orcid.org/0009-0007-1834-0520
Liyin XiaoCollege of Computer Science, Sichuan University, Chengdu, China.ORCID https://orcid.org/0009-0003-4302-9436
Lingqiu DongDivision of Nephrology, Department of Medicine, West China Hospital of Sichuan University, Chengdu, China.ORCID https://orcid.org/0000-0003-0231-2625
Zhengxia ZhongDivision of Nephrology, Department of Medicine, Affiliated Hospital of Zunyi Medical University, Zunyi, China.ORCID https://orcid.org/0000-0002-3112-4845
Ling ZhouDivision of Nephrology, Zigong Third People's Hospital, Zigong, China.ORCID https://orcid.org/0009-0005-7600-191X
Wei QinDivision of Nephrology, Department of Medicine, West China Hospital of Sichuan University, Chengdu, China.ORCID https://orcid.org/0000-0003-4246-5431

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTraditional risk models for immunoglobulin A nephropathy (IgAN), which primarily rely on renal indicators, lack comprehensive assessment and therapeutic guidance, necessitating more refined and integrative approaches.

objectiveThis study integrated network biomarkers with unsupervised learning clustering (k-means clustering based on network biomarkers [KMN]) to refine risk stratification in IgAN and explore its clinical value.

methodsInvolving a multicenter prospective cohort, we analyzed 1460 patients and validated the approach externally with 200 additional patients. Deeper metabolic and microbiomic insights were gained from 2 distinct cohorts: 63 patients underwent ultraperformance liquid chromatography-mass spectrometry, while another 45 underwent fecal 16S RNA sequencing. Our approach used hierarchical clustering and k-means methods, using 3 sets of indicators: demographic and renal indicators, renal and extrarenal indicators, and network biomarkers derived from all indicators.

resultsAmong 6 clustering methods tested, the KMN scheme was the most effective, accurately reflecting patient severity and prognosis with a prognostic accuracy area under the curve (AUC) of 0.77, achieved solely through cluster grouping without additional indicators. The KMN stratification significantly outperformed the existing International IgA Nephropathy Prediction Tool (AUC of 0.72) and renal function-renal histology grading schemes (AUC of 0.69). Clinically, this stratification facilitated personalized treatment, recommending angiotensin-converting enzyme inhibitors or angiotensin receptor blockers for lower-risk groups and considering immunosuppressive therapy for higher-risk groups. Preliminary findings also indicated a correlation between IgAN progression and alterations in serum metabolites and gut microbiota, although further research is needed to establish causality.

conclusionsThe effectiveness and applicability of the KMN scheme indicate its substantial potential for clinical application in IgAN management.

Indexed as

BiomarkersGlomerulonephritis, IGAAdultCluster AnalysisFemaleHumansMaleMiddle AgedPrognosisProspective StudiesRisk AssessmentBiomarkersBerger diseasebiomarkerschronic kidney diseaseglomerulonephritisgut microbiotaIgAIgA nephropathyimmune systemimmunoglobulin Akidneykidney inflammationmetabolomicsnephritisnephropathynetwork biomarkerprospective cohortrenalrenal biopsyrenal diseaserisk stratificationsynpharyngitic glomerulonephritisunsupervised learning

Identifiers

PMID40063072
PMCPMC11933752

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.