Evidence map›Paper›PMID 40060586›Full record

ArticlebioRxiv : the preprint server for biology2025

Neurons exploit stochastic growth to rapidly and economically build dense radially oriented dendritic arbors.

Xiaoyi Ouyang, Sabyasachi Sutradhar, Olivier Trottier, Sonal Shree, Qiwei Yu, Yuhai Tu, Jonathon Howard

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Xiaoyi OuyangDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.ORCID 0000-0001-7758-7899
Sabyasachi SutradharDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.ORCID 0000-0002-5826-5891
Olivier TrottierDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.ORCID 0000-0002-7437-4801
Sonal ShreeDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.ORCID 0000-0002-5665-8157
Qiwei YuLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.ORCID 0000-0003-0610-3484
Yuhai TuIBM T.J. Watson Research Center, Yorktown Heights, NY 10598, USA.ORCID 0000-0002-4589-981X
Jonathon HowardDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06511, USA.ORCID 0000-0003-0086-1196

Funding

Dendrite structure: Data-Driven Models to Bridge from Molecules to MorphologyR01NS118884 · NINDS · YALE UNIVERSITY · PI HOWARD, JONATHON · 2021 to 2025
$2.0M
Molecular Mechanisms and Biochemical Circuits for Adaptation in Biological SystemsR35GM131734 · NIGMS · IBM THOMAS J. WATSON RESEARCH CENTER · PI TU, YUHAI · 2019 to 2024
$1.8M
NIGMS NIH HHS R35 GM131734NINDS NIH HHS R01 NS118884
6 · The paper itself

Abstract

Dendrites grow by stochastic branching, elongation, and retraction. A key question is whether such a mechanism is sufficient to form highly branched dendritic morphologies. Alternatively, are signals from other cells or is the topological hierarchy of the growing network necessary for dendrite geometry? To answer these questions, we developed a mean-field model in which branch dynamics is isotropic and homogenous (i.e., no extrinsic instruction) and depends only on the average lengths and densities of branches. Branching is modeled as density-dependent nucleation so there are no tree structures and no network topology. Despite its simplicity, the model predicted several key morphological properties of class IV Drosophila sensory dendrites, including the exponential distribution of branch lengths, the parabolic scaling between dendrite number and length densities, the tight spacing of the dendritic meshwork (which required minimal total branch length), and the radial orientation of branches. Stochastic growth also accelerated the overall expansion rate of the arbor. Therefore, stochastic dynamics is an economical and rapid space-filling mechanism for building dendritic arbors without external guidance or hierarchical branching mechanisms. Our model provides a general theoretical framework for understanding how macroscopic branching patterns emerge from microscopic dynamics.

Indexed as

branching morphogenesisgeometric scalingmean-field modelneuronal developmentspace-filling

Identifiers

PMID40060586
PMCPMC11888375

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.