Evidence map›Paper›PMID 40060526›Full record

ArticlebioRxiv : the preprint server for biology2025

Combining Sampling Methods with Attractor Dynamics in Spiking Models of Head-Direction Systems.

Vojko Pjanovic, Jacob Zavatone-Veth, Paul Masset, Sander Keemink, Michele Nardin

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Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Vojko PjanovicJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
Jacob Zavatone-VethSociety of Fellows and Center for Brain Science, Harvard University, Cambridge, MA, USA.ORCID 0000-0002-4060-1738
Paul MassetDepartment of Psychology, McGill University, Montréal QC, Canada.ORCID 0000-0003-2001-7515
Sander KeeminkDepartment of Machine Learning and Neural Computing, Donders Institute for Brain, Cognition and Behaviour, Radboud University, Netherlands.ORCID 0000-0001-5043-6724
Michele NardinJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0001-8849-6570

Funding

Understanding data-driven models for neural dynamicsDP5OD037354 · OD · HARVARD UNIVERSITY · PI Jacob Andreas Zavatone-Veth · 2024 to 2026
$1.3M
NIH HHS DP5 OD037354
6 · The paper itself

Abstract

Uncertainty is a fundamental aspect of the natural environment, requiring the brain to infer and integrate noisy signals to guide behavior effectively. Sampling-based inference has been proposed as a mechanism for dealing with uncertainty, particularly in early sensory processing. However, it is unclear how to reconcile sampling-based methods with operational principles of higher-order brain areas, such as attractor dynamics of persistent neural representations. In this study, we present a spiking neural network model for the head-direction (HD) system that combines sampling-based inference with attractor dynamics. To achieve this, we derive the required spiking neural network dynamics and interactions to perform sampling from a large family of probability distributions-including variables encoded with Poisson noise. We then propose a method that allows the network to update its estimate of the current head direction by integrating angular velocity samples-derived from noisy inputs-with a pull towards a circular manifold, thereby maintaining consistent attractor dynamics. This model makes specific, testable predictions about the HD system that can be examined in future neurophysiological experiments: it predicts correlated subthreshold voltage fluctuations; distinctive short- and long-term firing correlations among neurons; and characteristic statistics of the movement of the neural activity "bump" representing the head direction. Overall, our approach extends previous theories on probabilistic sampling with spiking neurons, offers a novel perspective on the computations responsible for orientation and navigation, and supports the hypothesis that sampling-based methods can be combined with attractor dynamics to provide a viable framework for studying neural dynamics across the brain.

Identifiers

PMID40060526
PMCPMC11888369

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.