Evidence map›Paper›PMID 40060456›Full record

ArticlebioRxiv : the preprint server for biology2025

Genomic factors limiting the diversity of Saccharomycotina plant pathogens.

Sun Lee, Caroline West, Dana A Opulente, Marie-Claire Harrison, John F Wolters, Xing-Xing Shen, Xiaofan Zhou, Marizeth Groenewald, Chris Todd Hittinger, Antonis Rokas and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Sun LeeNorth Carolina Research Center (NCRC), Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Kannapolis, NC 28081, U.S.A.
Caroline WestNorth Carolina Research Center (NCRC), Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Kannapolis, NC 28081, U.S.A.
Dana A OpulenteBiology Department, Villanova University, Villanova, PA 19085, U.S.A.ORCID 0000-0003-3224-7510
Marie-Claire HarrisonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, U.S.A.ORCID 0000-0002-3013-9906
John F WoltersLaboratory of Genetics, Wisconsin Energy Institute, Center for Genomic Science Innovation, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Madison, WI 53726, U.S.A.ORCID 0000-0002-5477-4250
Xing-Xing ShenCentre for Evolutionary and Organismal Biology, Institute of Insect Sciences, Zhejiang University, Hangzhou, China.ORCID 0000-0001-5765-1419
Xiaofan ZhouGuangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Center, South China Agricultural University, Guangzhou, China.ORCID 0000-0002-2879-6317
Marizeth GroenewaldWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.ORCID 0000-0003-0835-5925
Chris Todd HittingerLaboratory of Genetics, Wisconsin Energy Institute, Center for Genomic Science Innovation, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Madison, WI 53726, U.S.A.ORCID 0000-0001-5088-7461
Antonis RokasDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235, U.S.A.ORCID 0000-0002-7248-6551
Abigail Leavitt LaBellaNorth Carolina Research Center (NCRC), Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Kannapolis, NC 28081, U.S.A.ORCID 0000-0003-0068-6703

Funding

Deciphering the phenotypic and genomic traits that underlie the evolution of pathogenicity differences among Aspergillus fumigatus and its close relativesR01AI153356 · NIAID · VANDERBILT UNIVERSITY · PI Antonis Rokas · 2022 to 2026
$3.5M
Role of codon usage bias in eukaryotic evolution and regulationR35GM155455 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI Abigail LaBella · 2024 to 2026
$1.1M
NIAID NIH HHS R01 AI153356NIGMS NIH HHS R35 GM155455
6 · The paper itself

Abstract

The Saccharomycotina fungi have evolved to inhabit a vast diversity of habitats over their 400-million-year evolution. There are, however, only a few known fungal pathogens of plants in this subphylum, primarily belonging to the genera

Indexed as

fungiphytopathogenreverse ecologySaccharomycotina

Identifiers

PMID40060456
PMCPMC11888420

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.