Evidence map›Paper›PMID 40057520›Full record

ArticleNature communications2025

Longitudinal single cell profiling of epitope specific memory CD4+ T cell responses to recombinant zoster vaccine.

Xiaomin Wen, Alex K Hu, Scott R Presnell, Emily S Ford, David M Koelle, William W Kwok

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Single-cell RNA sequencing offers novel perspectives in viral infection research.Frontiers in cellular and infection microbiology · 2026
    Pooled it
  2. Varicella zoster virus and the central nervous system.Nature reviews. Microbiology · 2026
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiaomin WenCenter for Translational Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-0472-9021
Alex K HuCenter for Systems Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA.
Scott R PresnellCenter for Systems Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA.ORCID http://orcid.org/0000-0001-9203-6403
Emily S FordDepartment of Medicine, University of Washington School of Medicine, Seattle, WA, USA.
David M KoelleCenter for Translational Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA.ORCID http://orcid.org/0000-0003-1255-9023
William W KwokCenter for Translational Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA. bkwok@benaroyaresearch.org.ORCID http://orcid.org/0000-0003-4843-4599

Funding

Cutaneous Pathogen-Specific Tissue Resident Memory T Cells in Human AgingR01AG064800 · NIA · UNIVERSITY OF WASHINGTON · PI KOELLE, DAVID M · 2019 to 2023
$3.5M
HSV-2 specificity and phenotyping of tissue-based T cells in genital skin biopsies of HSV-2 reactivationK08AI148588 · NIAID · UNIVERSITY OF WASHINGTON · PI FORD, EMILY · 2020 to 2024
$947k
NIAID NIH HHS HHSN272201400049CNIAID NIH HHS K08 AI148588NIA NIH HHS R01 AG064800
6 · The paper itself

Abstract

Vaccination leads to rapid expansion of antigen-specific T cells within in the first few days. However, understanding of transcriptomic changes and fates of antigen-specific T cells upon vaccination remains limited. Here, we investigate the fate of memory CD4+ T cells upon reactivation to recombinant zoster vaccine for shingles at cellular and transcriptional levels. We show that glycoprotein E-specific memory CD4+ T cells respond strongly, their frequencies remain high, and they retain markers of cell activation one year following vaccination. Memory T cells with the most dominant TCR clonotype pre-vaccination remain prevalent at year one post-vaccination. These data implicate a major role for pre-existing memory T cells in perpetuating immune repertoires upon re-encountering cognate antigens. Differential gene expression indicates that cells post-vaccination are distinct from cells at baseline, suggesting committed memory T cells display transcriptional changes upon vaccination that could alter their responses against cognate immunogens.

Indexed as

CD4-Positive T-LymphocytesEpitopes, T-LymphocyteHerpes ZosterHerpes Zoster VaccineImmunologic MemoryMemory T CellsFemaleHerpesvirus 3, HumanHumansLongitudinal StudiesSingle-Cell AnalysisVaccinationVaccines, SyntheticViral Envelope ProteinsEpitopes, T-Lymphocyteglycoprotein E, varicella-zoster virusHerpes Zoster VaccineVaccines, SyntheticViral Envelope Proteins

Identifiers

PMID40057520
PMCPMC11890790

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.