Evidence map›Paper›PMID 40056068›Full record

ArticleBioFactors (Oxford, England)

Molecular and cell phenotype programs in oral epithelial cells directed by co-exposure to arsenic and smokeless tobacco.

Samrat Das, Shefali Thakur, Vincent Cahais, François Virard, Liesel Claeys, Claire Renard, Cyrille Cuenin, Marie-Pierre Cros, Stéphane Keïta, Assunta Venuti and 5 more

Abstract read
In one paragraph

Article in BioFactors (Oxford, England). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Samrat DasEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Shefali ThakurEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Vincent CahaisEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
François VirardEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Liesel ClaeysEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Claire RenardEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Cyrille CueninEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Marie-Pierre CrosEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Stéphane KeïtaEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Assunta VenutiEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Cécilia SirandEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Akram GhantousEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Zdenko HercegEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Michael KorenjakEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.
Jiri ZavadilEpigenomics and Mechanisms Branch, International Agency for Research on Cancer, Lyon, France.ORCID https://orcid.org/0000-0003-0640-5562

Funding

Modeling mutational landscapes of primary cancers using an in vitro cell immortalization assayR03ES025023 · NIEHS · INTERNATIONAL AGENCY FOR RES ON CANCER · PI OLIVIER, MAGALI · 2015 to 2016
$113k
INCa-INSERM Plan Cancer 2015 ENV201507NIEHS NIH HHS R03 ES025023NIEHS NIH HHS R03ES025023World Health Organization 001
6 · The paper itself

Abstract

Chronic exposure to arsenic can lead to various health issues, including cancer. Concerns have been mounting about the enhancement of arsenic toxicity through co-exposure to various prevalent lifestyle habits. Smokeless tobacco (SLT) products are commonly consumed in South Asian countries, where their use frequently co-occurs with exposure to arsenic from contaminated groundwater. To decipher the in vitro molecular and cellular responses to arsenic and/or smokeless tobacco, we performed temporal multi-omics analysis of the transcriptome and DNA methylome remodeling in exposed hTERT-immortalized human normal oral keratinocytes (NOK), as well as arsenic and/or smokeless tobacco genotoxicity and mutagenicity investigations in NOK cells and in human p53 knock-in murine embryonic fibroblasts (Hupki MEF). RNAseq results from acute exposures of NOK cell to arsenic alone and in combination with smokeless tobacco extract revealed upregulation of genes with roles in cell cycle changes, apoptosis and inflammatory responses. This was in keeping with global DNA hypomethylation affecting genes involved in the same processes after chronic treatment. At the phenotypic level, we observed a dose-dependent decrease in NOK cell viability, induction of DNA damage, cell cycle changes and increased apoptosis, with the most pronounced effects observed under arsenic and SLT co-exposure conditions. Live-cell imaging experiments indicated that the DNA damage likely resulted from induction of apoptosis, an observation validated by a lack of exome-wide mutagenesis in response to chronic exposure to arsenic and/or smokeless tobacco. In sum, our integrative omics study provides novel insights into the acute and chronic responses to arsenic and smokeless tobacco (co-)exposure, with both types of responses converging on several key mechanisms associated with cancer hallmark processes. The resulting rich catalogue of molecular programs in oral cells regulated by arsenic and smokeless tobacco (co-)exposure may provide bases for future development of biomarkers for use in molecular cancer epidemiology studies of exposed populations at risk.

Indexed as

ArsenicEpithelial CellsTobacco, SmokelessAnimalsApoptosisCell LineCell SurvivalDNA DamageDNA MethylationFibroblastsHumansKeratinocytesMicePhenotypeTranscriptomeArsenicapoptosisarsenicDNA methylationgene expressioninflammatory responselive cell analysisoral cellssmokeless tobaccowhole‐exome sequencing

Identifiers

PMID40056068
PMCPMC11962598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.