Evidence map›Paper›PMID 40052137›Full record

ArticlemicroPublication biology2025

Yeast mutation rates in alternative carbon sources reflect the influence of reactive oxygen species.

Keerthana Thota, Jacob D Fredette-Roman, Nathaniel P Sharp

Abstract read
In one paragraph

Article in microPublication biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Keerthana ThotaDepartment of Genetics , University of Wisconsin-Madison, Madison, Wisconsin, United States.
Jacob D Fredette-RomanDepartment of Genetics , University of Wisconsin-Madison, Madison, Wisconsin, United States.
Nathaniel P SharpDepartment of Genetics , University of Wisconsin-Madison, Madison, Wisconsin, United States.

Funding

The evolutionary and genomic drivers of mutation spectraR35GM154954 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Nathaniel Sharp · 2024 to 2026
$1.1M
NIGMS NIH HHS R35 GM154954
6 · The paper itself

Abstract

Environmental conditions can influence mutation rates, but the reasons are often unclear. Budding yeast can utilize many carbon sources, with variation in the degree of fermentation versus respiration. Since aerobic respiration produces mutagenic reactive oxygen species, we hypothesized that yeast grown in media promoting aerobic respiration would show higher mutation rates. We found significant differences across five media types, with the highest mutation rate in pyruvate and the lowest in glucose. However, mutation rates responded to respiration rate in a nonlinear fashion, suggesting that the degree of respiration in a given environment is only partly predictive of mutation rate.

Identifiers

PMID40052137
PMCPMC11883470

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.