Evidence map›Paper›PMID 40050400›Full record

ArticleCommunications medicine2025

Deep learning-based image analysis in muscle histopathology using photo-realistic synthetic data.

Leonid Mill, Oliver Aust, Jochen A Ackermann, Philipp Burger, Monica Pascual, Katrin Palumbo-Zerr, Gerhard Krönke, Stefan Uderhardt, Georg Schett, Christoph S Clemen and 5 more

Abstract read
In one paragraph

Article in Communications medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Leonid MillMIRA Vision Microscopy GmbH, 73037, Göppingen, Germany. Lmill@mira.vision.ORCID http://orcid.org/0000-0001-6449-7309
Oliver AustDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Jochen A AckermannDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Philipp BurgerDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Monica PascualDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Katrin Palumbo-ZerrDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Gerhard KrönkeDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.
Stefan UderhardtDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.ORCID http://orcid.org/0000-0002-2489-2109
Georg SchettDepartment of Medicine 3 - Rheumatology and Immunology & Deutsches Zentrum für Immuntherapie, Friedrich-Alexander University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, 91054, Erlangen, Germany.ORCID http://orcid.org/0000-0001-8740-9615
Christoph S ClemenInstitute of Aerospace Medicine, German Aerospace Center (DLR), Cologne, Germany.ORCID http://orcid.org/0000-0002-1291-4219
Christian HoltzhausenDepartment of Neuropathology, Universitätsklinikum Erlangen, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91054, Erlangen, Germany.
Samir JabariDepartment of Neuropathology, Universitätsklinikum Erlangen, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91054, Erlangen, Germany.
Rolf SchröderDepartment of Neuropathology, Universitätsklinikum Erlangen, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91054, Erlangen, Germany.
Andreas MaierPattern Recognition Lab, Friedrich-Alexander University Erlangen-Nürnberg (FAU), 91058, Erlangen, Germany.ORCID http://orcid.org/0000-0002-9550-5284
Anika GrüneboomLeibniz-Institut für Analytische Wissenschaften - ISAS - e.V, 44139, Dortmund, Germany. anika.grueneboom@isas.de.ORCID http://orcid.org/0000-0002-7928-5613

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 505539112Deutsche Forschungsgemeinschaft (German Research Foundation) CRC TRR332 C5EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101039438EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 810316
6 · The paper itself

Abstract

backgroundArtificial intelligence (AI), specifically Deep learning (DL), has revolutionized biomedical image analysis, but its efficacy is limited by the need for representative, high-quality large datasets with manual annotations. While latest research on synthetic data using AI-based generative models has shown promising results to tackle this problem, several challenges such as lack of interpretability and need for vast amounts of real data remain. This study aims to introduce a new approach-SYNTA-for the generation of photo-realistic synthetic biomedical image data to address the challenges associated with state-of-the art generative models and DL-based image analysis.

methodsThe SYNTA method employs a fully parametric approach to create photo-realistic synthetic training datasets tailored to specific biomedical tasks. Its applicability is tested in the context of muscle histopathology and skeletal muscle analysis. This new approach is evaluated for two real-world datasets to validate its applicability to solve complex image analysis tasks on real data.

resultsHere we show that SYNTA enables expert-level segmentation of unseen real-world biomedical data using only synthetic training data. By addressing the lack of representative and high-quality real-world training data, SYNTA achieves robust performance in muscle histopathology image analysis, offering a scalable, controllable and interpretable alternative to generative models such as Generative Adversarial Networks (GANs) or Diffusion Models.

conclusionsSYNTA demonstrates great potential to accelerate and improve biomedical image analysis. Its ability to generate high-quality photo-realistic synthetic data reduces reliance on extensive collection of data and manual annotations, paving the way for advancements in histopathology and medical research.

Identifiers

PMID40050400
PMCPMC11885816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.