Evidence map›Paper›PMID 40050380›Full record

ArticleCommunications biology2025

One-step Cre-loxP organism creation by TAx9.

Martin Miguel Casco-Robles, Tomoki Echigoya, Takeaki Shimazaki, Yuri Murakami, Masaya Hirano, Fumiaki Maruo, Seiya Mizuno, Satoru Takahashi, Chikafumi Chiba

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Martin Miguel Casco-RoblesInstitute of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan. casco.miguel.gm@u.tsukuba.ac.jp.ORCID http://orcid.org/0000-0002-3563-4017
Tomoki EchigoyaGraduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Takeaki ShimazakiGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Yuri MurakamiGraduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Masaya HiranoGraduate School of Science and Technology, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Fumiaki MaruoInstitute of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Seiya MizunoLaboratory Animal Resource Center in Transborder Medical Research Center, Institute of Medicine, University of Tsukuba, Tsukuba, Ibaraki, Japan.ORCID http://orcid.org/0000-0002-6740-5817
Satoru TakahashiLaboratory Animal Resource Center in Transborder Medical Research Center, Institute of Medicine, University of Tsukuba, Tsukuba, Ibaraki, Japan.ORCID http://orcid.org/0000-0002-8540-7760
Chikafumi ChibaInstitute of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan. chichiba@biol.tsukuba.ac.jp.ORCID http://orcid.org/0000-0002-7767-2150

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 18H04061MEXT | Japan Society for the Promotion of Science (JSPS) 23H05483MEXT | Japan Society for the Promotion of Science (JSPS) 24240062
6 · The paper itself

Abstract

The creation of organisms with Cre-loxP conditional gene recombination systems often faces challenges, particularly when creating the initial (F0) generation with both a Cre recombinase and a DNA site flanked by loxP elements (floxed site). The primary reason is that it is difficult to synthesize a single plasmid with both the Cre gene and the floxed site, since Cre-mediated recombination spontaneously occurs when the plasmid is amplified in Escherichia coli bacterial cells. Here, we introduce an artificial nucleic acid sequence TATATATATATATATATA, named TAx9, that enables the integration of both the Cre gene and the floxed site into a single plasmid. TAx9 effectively blocks spontaneous Cre-mediated recombination in E. coli cells. Using this system, we created an F0 generation of transgenic newts and CRISPR-Cas9 knock-in mice with tissue-specific Cre recombination triggered by tamoxifen. TAx9 technology will be a powerful strategy for creating organisms capable of conditional genetic modification in the F0 generation, accelerating various life science research by reducing the time and cost for ultimately establishing and maintaining lines of genetically modified organisms.

Indexed as

IntegrasesRecombination, GeneticAnimalsCRISPR-Cas SystemsEscherichia coliMiceMice, TransgenicPlasmidsCre recombinaseIntegrases

Identifiers

PMID40050380
PMCPMC11885649

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.