Evidence map›Paper›PMID 40050069›Full record

ArticleRNA (New York, N.Y.)2025

Inconsistencies in the published rabbit ribosomal rRNAs: a proposal for uniformity in sequence and site numbering.

Swastik De, Michelle Zhou, Zuben P Brown, Raymond N Burton-Smith, Yaser Hashem, Tatyana V Pestova, Christopher U T Hellen, Joachim Frank

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Swastik De *Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York 10032, USA.ORCID 0000-0002-9302-724X
Michelle Zhou *Irvington High School, Irvington, New York 10533, USA.
Zuben P Brown *Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York 10032, USA.ORCID 0000-0002-9846-2822
Raymond N Burton-SmithExploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
Yaser HashemInstitut Européen de Chimie et Biologie, U1212 Inserm, Université de Bordeaux, 33607 Pessac, France.
Tatyana V PestovaDepartment of Cell Biology, SUNY Downstate Medical Center, Brooklyn, New York 11203, USA.ORCID 0000-0003-3543-256X
Christopher U T HellenDepartment of Cell Biology, SUNY Downstate Medical Center, Brooklyn, New York 11203, USA christopher.hellen@downstate.edu jf2192@cumc.columbia.edu.ORCID 0000-0002-3982-2090
Joachim FrankDepartment of Biochemistry and Molecular Biophysics, Columbia University, New York, New York 10032, USA christopher.hellen@downstate.edu jf2192@cumc.columbia.edu.ORCID 0000-0001-5449-6943

Funding

Mechanisms of eukaryotic translation and ribosome-associated mRNA surveillance and protein quality controlR35GM122602 · NIGMS · SUNY DOWNSTATE MEDICAL CENTER · PI TATYANA V PESTOVA · 2017 to 2026
$4.8M
Structural Studies of Macromolecular Assemblies Using Cryo-EMR35GM139453 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FRANK, JOACHIM · 2021 to 2025
$3.9M
Alternative mechanisms of different stages in eukaryotic translationR01GM097014 · NIGMS · SUNY DOWNSTATE MEDICAL CENTER · PI HELLEN, CHRISTOPHER ULRICH TRISTRAM · 2012 to 2022
$2.6M
NIGMS NIH HHS R01 GM097014NIGMS NIH HHS R35 GM122602NIGMS NIH HHS R35 GM139453
6 · The paper itself

Abstract

Examination of all publicly available

Indexed as

RibosomesRNA, Ribosomal, 18SRNA, Ribosomal, 28SAnimalsBase SequenceCryoelectron MicroscopyModels, MolecularNucleic Acid ConformationRabbitsRNA, Ribosomal, 18SRNA, Ribosomal, 28S18S rRNA28S rRNA5.8S rRNA5S rRNAand cryo-electron microscopyribosome

Identifiers

PMID40050069
PMCPMC12084882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.