Evidence map›Paper›PMID 40047534›Full record

ArticleBiochemistry2025

Crystal Structure, Modeling, and Identification of Key Residues Provide Insights into the Mechanism of the Key Toxoflavin Biosynthesis Protein ToxD.

Savannah F Justen, Michael K Fenwick, Kyle K Axt, James A Cherry, Steven E Ealick, Benjamin Philmus

Abstract read
In one paragraph

Article in Biochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Savannah F JustenDepartment of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97331, United States.
Michael K FenwickDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0001-5066-4962
Kyle K AxtDepartment of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97331, United States.
James A CherryDepartment of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97331, United States.
Steven E EalickDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0001-8548-112X
Benjamin PhilmusDepartment of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97331, United States.ORCID 0000-0003-2085-0873

Funding

Training and OutreachP30GM124166 · NIGMS · CORNELL UNIVERSITY · PI RICHARD A. CERIONE · 2019 to 2026
$28.3M
Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Structural Studies of Enzymes of Thiamin BiosynthesisR01DK067081 · NIDDK · CORNELL UNIVERSITY ITHACA · PI EALICK, STEVEN E · 2005 to 2017
$4.2M
Structural Biology of Purine and Pyrimidine Biosynthesis and MetabolismR01GM073220 · NIGMS · CORNELL UNIVERSITY ITHACA · PI EALICK, STEVEN E · 2005 to 2012
$2.4M
NIDDK NIH HHS R01 DK067081NIGMS NIH HHS P30 GM124166NIGMS NIH HHS P41 GM103403NIGMS NIH HHS P41 GM103485NIGMS NIH HHS R01 GM073220
6 · The paper itself

Abstract

Toxoflavin, a toxic secondary metabolite produced by a variety of bacteria, has been implicated as a causative agent in food poisoning and a virulence factor in phytopathogenic bacteria. This toxin is produced by genes encoded in the

Indexed as

Bacterial ProteinsPyrimidinonesTriazinesAmino Acid SequenceBurkholderiaCatalytic DomainCrystallography, X-RayModels, MolecularMutagenesis, Site-DirectedProtein ConformationPseudomonasBacterial ProteinsPyrimidinonestoxoflavinTriazines

Identifiers

PMID40047534
PMCPMC11989309

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.