Evidence map›Paper›PMID 40044941›Full record

ArticleNature plants2025

Structural basis for the activation of plant bunyavirus replication machinery and its dual-targeted inhibition by ribavirin.

Jia Li, Lei Cao, Yaqian Zhao, Jinghan Shen, Lei Wang, Mingfeng Feng, Min Zhu, Yonghao Ye, Richard Kormelink, Xiaorong Tao and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Nature plants, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Journal of virology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Host ESCRT machinery orchestrates the assembly of tomato spotted wilt virus ribonucleoproteins.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. The 6-kilodalton peptide 1 of the familyFrontiers in microbiology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Jia Li *State Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-3622-0342
Lei Cao *CAS Key Laboratory of Infection and Immunity, National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Yaqian ZhaoState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.
Jinghan ShenState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.
Lei WangCAS Key Laboratory of Infection and Immunity, National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Mingfeng FengState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.
Min ZhuState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.
Yonghao YeState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0003-3538-6006
Richard KormelinkLaboratory of Virology, Department of Plant Sciences, Wageningen University, Wageningen, the Netherlands.
Xiaorong TaoState Key Laboratory of Agricultural and Forestry Biosecurity, Nanjing Agricultural University, Nanjing, China. taoxiaorong@njau.edu.cn.ORCID 0000-0003-1259-366X
Xiangxi WangCAS Key Laboratory of Infection and Immunity, National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China. xiangxi@ibp.ac.cn.ORCID 0000-0003-0635-278X

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32170162National Natural Science Foundation of China (National Science Foundation of China) 32220103008
6 · The paper itself

Abstract

Despite the discovery of plant viruses as a new class of pathogens over a century ago, the structure of plant virus replication machinery and antiviral pesticide remains lacking. Here we report five cryogenic electron microscopy structures of a ~330-kDa RNA-dependent RNA polymerase (RdRp) from a devastating plant bunyavirus, tomato spotted wilt orthotospovirus (TSWV), including the apo, viral-RNA-bound, base analogue ribavirin-bound and ribavirin-triphosphate-bound states. They reveal that a flexible loop of RdRp's motif F functions as 'sensor' to perceive viral RNA and further acts as an 'adaptor' to promote the formation of a complete catalytic centre. A ten-base RNA 'hook' structure is sufficient to trigger major conformational changes and activate RdRp. Chemical screening showed that ribavirin is effective against TSWV, and structural data revealed that ribavirin disrupts both hook-binding and catalytic core formation, locking polymerase in its inactive state. This work provides structural insights into the mechanisms of plant bunyavirus RdRp activation and its dual-targeted site inhibition, facilitating the development of pesticides against plant viruses.

Indexed as

Antiviral AgentsRibavirinRNA-Dependent RNA PolymeraseTospovirusVirus ReplicationCryoelectron MicroscopyRNA, ViralViral ProteinsAntiviral AgentsRibavirinRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID40044941
PMCPMC11928317

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.