Evidence map›Paper›PMID 40042991›Full record

ArticleMicrobial genomics2025

Differential effect of monoterpenes and flavonoids on the transcription of aromatic ring-hydroxylating dioxygenase genes in

Andrea Zubrova, Manuela Tadrosova, Jaroslav Semerad, Tomas Cajthaml, Petr Pajer, Michal Strejcek, Jachym Suman, Ondrej Uhlik

Abstract read
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In one paragraph

Article in Microbial genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Andrea ZubrovaDepartment of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Prague, Czech Republic.
Manuela TadrosovaDepartment of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Prague, Czech Republic.
Jaroslav SemeradInstitute of Microbiology, Academy of Sciences of the Czech Republic, v.v.i., Prague, Czech Republic.
Tomas CajthamlInstitute of Microbiology, Academy of Sciences of the Czech Republic, v.v.i., Prague, Czech Republic.
Petr PajerMilitary Health Institute, Ministry of Defence of the Czech Republic, Prague, Czech Republic.
Michal StrejcekDepartment of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Prague, Czech Republic.
Jachym SumanDepartment of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Prague, Czech Republic.
Ondrej UhlikDepartment of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Prague, Czech Republic.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aromatic ring-hydroxylating dioxygenases (ARHDs) play a crucial role in the aerobic biodegradation of both natural and anthropogenic aromatic compounds. Although their ability to process contaminants is not entirely understood, it is thought to have evolved from the transformation of structurally similar secondary plant metabolites (SPMs). Hence, to investigate this connection, we tested a variety of SPMs from the monoterpene and flavonoid classes as carbon sources and transcriptional effectors of several phylogenetically distant ARHD genes involved in the degradation of aromatic pollutants. Specifically, we focused on

Indexed as

DioxygenasesFlavonoidsMonoterpenesRhodococcusBacterial ProteinsBiodegradation, EnvironmentalGene Expression Regulation, BacterialPhylogenyTranscription, GeneticBacterial ProteinsDioxygenasesFlavonoidsMonoterpenesaromatic pollutantsaromatic ring-hydroxylating dioxygenasesbiodegradationflavonoidsmonoterpenesRhodococcus

Identifiers

PMID40042991
PMCPMC11881993

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.