Evidence map›Paper›PMID 40041392›Full record

ArticleFrontiers in chemistry2025

Spectroscopic characterization of bacterial colonies through UV hyperspectral imaging techniques.

Josune J Ezenarro, Mohammad Al Ktash, Nuria Vigues, Jordi Mas Gordi, Xavi Muñoz-Berbel, Marc Brecht

Abstract read
In one paragraph

Article in Frontiers in chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Josune J Ezenarro *Departament Genètica i Microbiologia, Universitat Autònoma de Barcelona, Barcelona, Spain.
Mohammad Al Ktash *Process Analysis and Technology PA & T, Reutlingen University, Reutlingen, Germany.
Nuria ViguesDepartament Genètica i Microbiologia, Universitat Autònoma de Barcelona, Barcelona, Spain.
Jordi Mas GordiDepartament Genètica i Microbiologia, Universitat Autònoma de Barcelona, Barcelona, Spain.
Xavi Muñoz-BerbelInstitut de Microelectrònica de Barcelona (IMB-CNM, CSIC), Universitat Autònoma de Barcelona, Barcelona, Spain.
Marc BrechtProcess Analysis and Technology PA & T, Reutlingen University, Reutlingen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Plate culturing and visual inspection are the gold standard methods for bacterial identification. Despite the growing attention on molecular biology techniques, colony identification using agar plates remains manual, interpretative, and heavily reliant on human experience, making it prone to errors. Advanced imaging techniques, like hyperspectral imaging, offer potential alternatives. However, the use of hyperspectral imaging in the VIS-NIR region has been hindered by sensitivity to various components and culture medium changes, leading to inaccurate results. The application of hyperspectral imaging in the ultraviolet (UV) region has not been explored, despite the presence of specific absorption and emission peaks in bacterial components. Methods: To address this gap, we developed a predictive model for bacterial colony detection and identification using UV hyperspectral imaging. The model utilizes hyperspectral images acquired in the UV wavelength range of 225-400 nm, processed with principal component analysis (PCA) and discriminant analysis (DA). The measurement setup includes a hyperspectral imager, a PC for automated data analysis, and a conveyor belt system to transport agar plates for automated analysis. Four bacterial species Results: The PCA-DA-based model demonstrated high accuracy (90%) in differentiating bacterial species based on the first three principal components, highlighting the potential of UV hyperspectral imaging for bacterial identification. Discussion: This study shows that UV hyperspectral imaging, coupled with advanced data analysis techniques, offers a robust and automated alternative to traditional methods for bacterial identification. The model's high accuracy emphasizes the untapped potential of UV hyperspectral imaging in microbiological analysis, reducing human error and improving reliability in bacterial species differentiation.

Indexed as

colony identificationdiscriminant analysishyperspectral imagingprincipal component analysisUV spectroscopy

Identifiers

PMID40041392
PMCPMC11876133

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.