Evidence map›Paper›PMID 40040295›Full record

ArticleAdvanced biology2025

3D Mechanical Confinement Directs Muscle Stem Cell Fate and Function.

GaYoung Park, Josh A Grey, Foteini Mourkioti, Woojin M Han

Abstract read
In one paragraph

Article in Advanced biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

GaYoung ParkDepartment of Orthopaedics, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Josh A GreyDepartment of Orthopaedics, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Foteini MourkiotiDepartment of Orthopaedic Surgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Woojin M HanDepartment of Orthopaedics, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.ORCID https://orcid.org/0000-0002-1383-5686

Funding

Notch-Modulatory Hydrogel for Dystrophic Muscle Stem Cell Rejuvenation and ExpansionR01AR080616 · NIAMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Woojin Han · 2022 to 2026
$2.4M
NIAMS NIH HHS R01 AR080616NIAMS NIH HHS R01AR080616
6 · The paper itself

Abstract

Muscle stem cells (MuSCs) play a crucial role in skeletal muscle regeneration, residing in a niche that undergoes dimensional and mechanical changes throughout the regeneration process. This study investigates how 3D confinement and stiffness encountered by MuSCs during the later stages of regeneration regulate their function, including stemness, activation, proliferation, and differentiation. An asymmetric 3D hydrogel bilayer platform is engineered with tunable physical constraints to mimic the regenerating MuSC niche. These results demonstrate that increased 3D confinement maintains Pax7 expression, reduces MuSC activation and proliferation, inhibits differentiation, and is associated with smaller nuclear size and decreased H4K16ac levels, suggesting that mechanical confinement modulates both nuclear architecture and epigenetic regulation. MuSCs in unconfined 2D environments exhibit larger nuclei and higher H4K16ac expression compared to those in more confined 3D conditions, leading to progressive activation, expansion, and myogenic commitment. This study highlights the importance of 3D mechanical cues in MuSC fate regulation, with 3D confinement acting as a mechanical brake on myogenic commitment, offering novel insights into the mechano-epigenetic mechanisms that govern MuSC behavior during muscle regeneration.

Indexed as

Muscle DevelopmentMuscle, SkeletalStem CellsAnimalsCell DifferentiationCell ProliferationEpigenesis, GeneticHydrogelsMicePAX7 Transcription FactorRegenerationHydrogelsPAX7 Transcription Factor3D confinementhydrogelsmechanobiologymechano‐epigeneticsmuscle stem cellsskeletal muscle

Identifiers

PMID40040295
PMCPMC12001014

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.