Evidence map›Paper›PMID 40038770›Full record

ArticlePneumonia (Nathan Qld.)2025

Fluorescent antibody-based detection and ultrastructural analysis of Streptococcus pneumoniae in human sputum.

Ana G Jop Vidal, Meg Francis, Maneesha Chitanvis, Kenichi Takeshita, Ithiel J Frame, Poonam Sharma, Patricio Vidal, Claudio F Lanata, Carlos Grijalva, William Daley and 1 more

Abstract read
In one paragraph

Article in Pneumonia (Nathan Qld.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Lactate Oxidase (LctO) Acts as a Metabolic Checkpoint RestrainingbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Heme-mediated selection of encapsulatedEmerging microbes & infections · 2025
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ana G Jop Vidal *Department of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS, USA.
Meg Francis *Department of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS, USA.
Maneesha ChitanvisRollins School of Public Health, Emory University, Atlanta, GA, USA.
Kenichi TakeshitaDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS, USA.
Ithiel J FrameDepartment of Pathology, University of Mississippi Medical Center, Jackson, MS, USA.
Poonam SharmaDepartment of Pathology, University of Mississippi Medical Center, Jackson, MS, USA.
Patricio VidalDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS, USA.
Claudio F LanataInstituto de Investigacion Nutricional, Lima, Peru.
Carlos GrijalvaDepartment of Health Policy, Vanderbilt University Medical Center, Nashville, TN, USA.
William DaleyDepartment of Pathology, University of Mississippi Medical Center, Jackson, MS, USA.
Jorge E VidalDepartment of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS, USA. jvidal@umc.edu.

Funding

The oxidation of heme-carrying proteins in the pathophysiology of pneumococcal diseaseR01AI175461 · NIAID · UNIVERSITY OF MISSISSIPPI MED CTR · PI Jorge Eugenio Vidal · 2024 to 2026
$1.2M
Mentoring in transmission of influenza and strategies for preventionK24AI148459 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GRIJALVA, CARLOS G · 2020 to 2024
$893k
DISSEMINATION OF MACROLIDE RESISTANCE ELEMENTS IN STREPTOCOCCUS PNEUMONIAER21AI144571 · NIAID · UNIVERSITY OF MISSISSIPPI MED CTR · PI STEPHENS, DAVID S, TZENG, YIH-LING · 2019 to 2020
$397k
International Society of Pneumonia and Pneumococcal Diseases 2024 Robert Austrian Research AwardNIAID NIH HHS K24 AI148459NIAID NIH HHS R01 AI175461NIAID NIH HHS R21 AI144571NIH HHS 5R21AI144571-03
6 · The paper itself

Abstract

backgroundPneumococcal pneumonia continues to be a significant global health burden, affecting both children and adults. Traditional diagnostic methods for sputum analysis remain challenging. The objective of this study was twofold: to develop a rapid and easy-to-perform assay for the identification of Streptococcus pneumoniae (Spn) directly in sputum specimens using fluorescence microscopy, and to characterize with high-resolution confocal microscopy the ultrastructure of pneumococci residing in human sputum.

methodsWe fluorescently labeled antibodies against the pneumococcal capsule (Spn-FLUO). The specificity and sensitivity of Spn-FLUO for detecting Spn was evaluated in vitro and in vivo using mouse models of carriage and disease, human nasopharyngeal specimens, and sputum from patients with pneumococcal pneumonia. Spn was confirmed in the specimens using culture and a species-specific qPCR assay. Spn strains were serotyped by Quellung. Confocal microscopy and Imaris software analysis were utilized to resolve the ultrastructure of pneumococci in human sputum.

resultsCompared with cultures and qPCR, Spn-FLUO demonstrated high sensitivity (78-96%) in nasopharyngeal samples from mice and humans. The limit of detection (LOD) in nasopharyngeal samples was ≥ 1.6 × 10⁴ GenEq/ml. The specificity in human nasopharyngeal specimens was 100%. In lung specimens from mice infected with pneumococci, Spn-FLUO reached 100% sensitivity with a LOD of ≥ 1.39 × 10⁴ GenEq/ml. In human sputum, the sensitivity for detecting Spn was 92.7% with a LOD of 3.6 × 10³ GenEq/ml. Ultrastructural studies revealed that pneumococci are expectorated as large aggregates with a median size of 1336 μm².

conclusionsSpn-FLUO is a rapid and sensitive assay for detecting Spn in human sputum within 30 min, encompassing a range of both vaccine and non-vaccine serotypes associated with pneumococcal pneumonia. The study highlights that most pneumococci form aggregates in human sputum.

Identifiers

PMID40038770
PMCPMC11881295

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.