Evidence map›Paper›PMID 40038532›Full record

ArticleGenes and immunity2025

Multi-omics clustering analysis carries out the molecular-specific subtypes of thyroid carcinoma: implicating for the precise treatment strategies.

Zhenglin Wang, Qijun Han, Xianyu Hu, Xu Wang, Rui Sun, Siwei Huang, Wei Chen

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Article in Genes and immunity, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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3 · Its place in the literature

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2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Zhenglin Wang *Department of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China.
Qijun Han *Department of interventional radiology, Fuyang People's Hospital, Fuyang, 236000, Anhui, PR China.
Xianyu Hu *Department of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China.
Xu WangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China.
Rui SunDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China.
Siwei HuangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China.
Wei ChenDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University Hefei, Hefei, 230022, Anhui, PR China. chenwei366@ahmu.edu.cn.ORCID 0000-0002-7541-6743

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thyroid cancer (TC) is the most prevalent endocrine malignancy worldwide. This study aimed to explore the molecular subtypes and improve the selection of targeted therapies. We used multi-omics data from 539 patients with DNA methylation, gene mutations, mRNA, lncRNA, and miRNA expressions. This study employed consensus clustering algorithms to identify molecular subtypes and used various bioinformatics tools to analyze genetic alterations, signaling pathways, immune infiltration, and responses to chemotherapy and immunotherapy. Two prognostically relevant TC subtypes, CS1 and CS2, were identified. CS2 was associated with a poorer prognosis of shorter progression-free survival times (P < 0.001). CS1 exhibited higher copy number alterations but a lower tumor mutation burden than CS2. CS2 exhibited activation in cell proliferation and immune-related pathways. Drug sensitivity analysis indicated CS2's higher sensitivity to cisplatin, doxorubicin, paclitaxel, and sunitinib, whereas CS1 was more sensitive to bicalutamide and FH535. The different activated pathways and sensitivity to drugs for the subtypes were further validated in an external cohort. Twenty-four paired tumors and adjacent normal tissues by immunohistochemical staining further demonstrated the prognostic value of CXCL17. In conclusion, we identified two distinct molecular subtypes of TC with significant implications for prognosis, genetic alterations, pathway activation, and treatment response.

Indexed as

Thyroid NeoplasmsBiomarkers, TumorCluster AnalysisDNA MethylationFemaleGene Expression Regulation, NeoplasticHumansMaleMicroRNAsMiddle AgedMultiomicsMutationPrognosisRNA, Long NoncodingBiomarkers, TumorMicroRNAsRNA, Long Noncoding

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.