Evidence map›Paper›PMID 40037843›Full record

ArticleGenome research2025

Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing

Rodolphe Dombey, Daniel Buendía-Ávila, Verónica Barragán-Borrero, Laura Diezma-Navas, Arturo Ponce-Mañe, José Mario Vargas-Guerrero, Rana Elias, Arturo Marí-Ordóñez

Abstract read
In one paragraph

Article in Genome research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rodolphe Dombey *Gregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0000-0002-3670-4128
Daniel Buendía-Ávila *Gregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0000-0001-7917-3155
Verónica Barragán-BorreroGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0000-0002-0718-1858
Laura Diezma-NavasGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0000-0001-5857-5091
Arturo Ponce-MañeGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0009-0000-5810-8768
José Mario Vargas-GuerreroGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0000-0001-9649-1075
Rana EliasGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria.ORCID 0009-0002-3724-3914
Arturo Marí-OrdóñezGregor Mendel Institute of Molecular Plant Biology (GMI) of the Austrian Academy of Sciences, Vienna 1030, Austria; arturo.mari-ordonez@gmi.oeaw.ac.at.ORCID 0000-0002-4416-6382

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A handful of model plants have provided insight into silencing of transposable elements (TEs) through RNA-directed DNA methylation (RdDM). Guided by 24 nt long small-interfering RNAs (siRNAs), this epigenetic regulation installs DNA methylation and histone modifications like H3K9me2, which can be subsequently maintained independently of siRNAs. However, the genome of the clonally propagating duckweed

Indexed as

AraceaeDNA Transposable ElementsEpigenesis, GeneticRNA, Small InterferingDNA MethylationGene Expression Regulation, PlantGenome, PlantHistonesDNA Transposable ElementsHistonesRNA, Small Interfering

Identifiers

PMID40037843
PMCPMC11960707

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.