Evidence map›Paper›PMID 40032974›Full record

ArticleCommunications medicine2025

Deep proteome profiling of metabolic dysfunction-associated steatotic liver disease.

Felix Boel, Vyacheslav Akimov, Mathias Teuchler, Mike Krogh Terkelsen, Charlotte Wilhelmina Wernberg, Frederik Tibert Larsen, Philip Hallenborg, Mette Munk Lauridsen, Aleksander Krag, Susanne Mandrup and 2 more

Abstract read
In one paragraph

Article in Communications medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
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  4. A refined protocol for the large-scale production of high-quality cerebral organoids.Journal of neural transmission (Vienna, Austria : 1996) · 2026
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  5. Article
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  8. Review
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  12. Review
  13. Toward Proteomic Precision Medicine for Steatotic Liver Diseases.Journal of the American Heart Association · 2025
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Felix BoelDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0003-4232-8613
Vyacheslav AkimovDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.
Mathias TeuchlerDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.
Mike Krogh TerkelsenDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0002-5478-7895
Charlotte Wilhelmina WernbergCenter for Functional Genomics and Tissue Plasticity (ATLAS), University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0001-8964-0650
Frederik Tibert LarsenDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.
Philip HallenborgDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.
Mette Munk LauridsenCenter for Functional Genomics and Tissue Plasticity (ATLAS), University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0003-0586-8549
Aleksander KragCenter for Functional Genomics and Tissue Plasticity (ATLAS), University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0002-9598-4932
Susanne MandrupDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0002-0961-5787
Kim RavnskjærDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.ORCID http://orcid.org/0000-0002-5322-3887
Blagoy BlagoevDepartment of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark. bab@bmb.sdu.dk.ORCID http://orcid.org/0000-0002-3596-0066

Funding

Danmarks Grundforskningsfond (Danish National Research Foundation) DNRF141Det Frie Forskningsråd (Danish Council for Independent Research) 1026-00013BNovo Nordisk Fonden (Novo Nordisk Foundation) NNF20OC0061575Novo Nordisk Fonden (Novo Nordisk Foundation) NNF22OC0080068
6 · The paper itself

Abstract

backgroundMetabolic dysfunction-associated steatotic liver disease (MASLD) affects roughly 1 in 3 adults and is a leading cause of liver transplants and liver related mortality. A deeper understanding of disease pathogenesis is essential to assist in developing blood-based biomarkers.

methodsHere, we use data-independent acquisition mass spectrometry to assess disease-state associated protein profiles in human liver, blood plasma, and white adipose tissue (WAT).

resultsIn liver, we find that MASLD is associated with an increased abundance of proteins involved in immune response and extracellular matrix (ECM) and a decrease in proteins involved in metabolism. Cell type deconvolution of the proteome indicates liver endothelial and hepatic stellate cells are the main source of ECM rearrangements, and hepatocytes are the major contributor to the changes in liver metabolism. In the blood, profiles of several MASLD-associated proteins correlate with expression in WAT rather than liver and so could serve as suitable liver disease predictors in a multi-protein panel marker. Moreover, our proteomics-based logistic regression models perform better than existing methods for predicting MASLD and liver fibrosis from human blood samples.

conclusionsOur comprehensive proteomic analysis deepens the understanding of liver function and MASLD pathology by elucidating key cellular mechanisms and multi-organ interactions, and demonstrates the robustness of a proteomics-based biomarker panel to enhance diagnosis of MASLD and significant fibrosis.

Identifiers

PMID40032974
PMCPMC11876662

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.