Evidence map›Paper›PMID 40032854›Full record

ArticleScientific reports2025

Inner membrane components of the plasmid pKM101 type IV secretion system TraE and TraD are DNA-binding proteins.

Zakaria Jemouai, Aleksandr Sverzhinsky, Jurgen Sygusch, John Pascal, Christian Baron

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Characterization of defensome genes and mobile genetic Elements in different types of pasture soil agroecosystems from the Brazilian Amazon.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zakaria JemouaiDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Québec, Canada.
Aleksandr SverzhinskyDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Québec, Canada.
Jurgen SyguschDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Québec, Canada.
John PascalDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Québec, Canada.
Christian BaronDepartment of Biochemistry and Molecular Medicine, Faculty of Medicine, Université de Montréal, Québec, Canada. christian.baronmtl@gmail.com.

Funding

CIHR #274108 and #469471
6 · The paper itself

Abstract

The increase of antimicrobial resistance constitutes a significant threat to human health. One of the mechanisms responsible for the spread of resistance to antimicrobials is the transfer of plasmids between bacteria by conjugation. This process is mediated by type IV secretion systems (T4SS) and previous studies have provided in vivo evidence for interactions between DNA and components of the T4SS. Here, we purified TraD and TraE, two inner membrane proteins from the Escherichia coli pKM101 T4SS. Using electrophoretic mobility shift assays and fluorescence polarization we showed that the purified proteins both bind single-stranded and double-stranded DNA in the nanomolar affinity range. The previously identified conjugation inhibitor BAR-072 inhibits TraE DNA binding in vitro, providing evidence for its mechanism of action. Site-directed mutagenesis identified conserved amino acids that are required for conjugation that may be targets for the development of more potent conjugation inhibitors.

Indexed as

DNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsMembrane ProteinsPlasmidsType IV Secretion SystemsConjugation, GeneticMutagenesis, Site-DirectedProtein BindingDNA-Binding ProteinsEscherichia coli ProteinsMembrane ProteinsType IV Secretion Systems

Identifiers

PMID40032854
PMCPMC11876611

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.