Evidence map›Paper›PMID 40031732›Full record

ArticleIEEE transactions on bio-medical engineering2025

Self-Supervised Feature Detection and 3D Reconstruction for Real-Time Neuroendoscopic Guidance.

Prasad Vagdargi, Ali Uneri, Stephen Z Liu, Craig K Jones, Alejandro Sisniega, Junghoon Lee, Patrick A Helm, Ryan P Lee, Mark G Luciano, Gregory D Hager and 1 more

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Article in IEEE transactions on bio-medical engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Prasad Vagdargi
Ali Uneri
Stephen Z Liu
Craig K Jones
Alejandro Sisniega
Junghoon Lee
Patrick A Helm
Ryan P Lee
Mark G Luciano
Gregory D Hager
Jeffrey H Siewerdsen

Funding

Imaging, Guidance, and QA for Emerging High-Precision Neurosurgical TechniquesU01NS107133 · NINDS · JOHNS HOPKINS UNIVERSITY · PI SIEWERDSEN, JEFFREY H, UNERI, ALI · 2019 to 2023
$3.3M
NINDS NIH HHS U01 NS107133
6 · The paper itself

Abstract

objectiveTransventricular approach to deep-brain targets offers direct visualization but also imparts deformation that challenges accurate neuronavigation. 3D reconstruction and registration of the endoscopic view could provide up-to-date, real-time guidance. We develop and evaluate a self-supervised feature detection method for 3D reconstruction and navigation in neuroendoscopy.

methodsUnlabeled neuroendoscopic video data from 15 clinical cases yielding 11,527 video frames yielding 11,527 video frames were used to train a self-supervised learning method (R2D2-E) with 5-fold cross validation integrated into a simultaneous localization and mapping (SLAM) pipeline for 3D reconstruction. A series of experiments guided nominal hyperparameters selection and evaluated performance in comparison to SIFT, SURF and SuperPoint in terms of the accuracy of feature matching and 3D reconstruction.

resultsR2D2-E demonstrated a superior performance in feature matching and 3D reconstruction. R2D2-E features achieved a median projected error of 0.64 mm compared to 0.90 mm, 0.99 mm and 0.83 mm error for SIFT, SURF and SuperPoint, respectively. The method also improved F1 score by 14%, 25% and 22% compared to SIFT, SURF and SuperPoint, respectively.

conclusionThe proposed feature detection approach enables accurate, real-time 3D reconstruction in neuroendoscopy, offering robust feature detection in the presence of endoscopic artifacts and provides up-to-date navigation following soft-tissue deformation. SIGNIFICANCE: The self-supervised feature detection method advances capabilities for vision-based guidance and augmented visualization of target structures in neuroendoscopic procedures. The approach could enhance the accuracy and precision of neurosurgery to improve patient outcomes.

Indexed as

Imaging, Three-DimensionalNeuroendoscopyNeuronavigationSupervised Machine LearningAlgorithmsBrainHumans

Identifiers

PMID40031732
PMCPMC12910575

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.