Evidence map›Paper›PMID 40025229›Full record

ArticleOncogene2025

PPDPF-mediated regulation of BCAA metabolism enhances mTORC1 activity and drives cholangiocarcinoma progression.

Zhi Li, Yidi Guan, Jie Gao, Lan Zhu, Zimei Zeng, Qianyu Jing, Quan Wan, Qi Fan, Xinxin Ren, Haiping Pei and 11 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Zhi Li *Key Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China.ORCID http://orcid.org/0000-0002-7166-9874
Yidi Guan *Key Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China.
Jie GaoKey Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China.
Lan ZhuNHC Key Laboratory of Pulmonary Immune-related Diseases, Guizhou Provincial People's Hospital, Guiyang, China.
Zimei ZengShanghai Key Laboratory of Thoracic Tumor Biotherapy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Qianyu JingNHC Key Laboratory of Pulmonary Immune-related Diseases, Guizhou Provincial People's Hospital, Guiyang, China.
Quan WanNHC Key Laboratory of Pulmonary Immune-related Diseases, Guizhou Provincial People's Hospital, Guiyang, China.
Qi FanShanghai Key Laboratory of Thoracic Tumor Biotherapy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Xinxin RenCancer Center, Department of Pathology, Zhejiang Provincial People's Hospital (Affiliated People's Hospital), Hangzhou Medical College, Hangzhou, Zhejiang, China.
Haiping PeiKey Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China.
Dexiang ZhangDepartment of General Surgery, Zhongshan Xuhui Hospital Affiliated to Fudan University, Shanghai, China.
Yefei RongThe Department of Emergency Surgery, the Department of General Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Zhuoxian RongKey Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China.
Junju HeDepartment of Oncology, Renmin Hospital of Wuhan University, Wuhan University, Wuhan, China.
Yuefang ZhangSongjiang Research Institute, Songjiang Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Nan LiDepartment of Hepatic Surgery I (Ward I), Shanghai Eastern Hepatobiliary Surgery Hospital, Shanghai, China.
Pan ChenHunan Cancer Hospital, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University, Changsha, China.
Lunquan SunKey Laboratory of Molecular Radiation Oncology (Xiangya Hospital, Central South University), Changsha, China. lunquansun@csu.edu.cn.ORCID http://orcid.org/0000-0002-0558-5250
Bin XuDepartment of Oncology, Renmin Hospital of Wuhan University, Wuhan University, Wuhan, China. xubin_oncology@whu.edu.cn.ORCID http://orcid.org/0000-0002-0499-0430
Yingjie NieDepartment of Research, the University of HongKong-Shenzhen Hospital, Shenzhen, China. nienyj@hotmail.com.ORCID http://orcid.org/0009-0007-4964-0948
Yuezhen DengShanghai Key Laboratory of Thoracic Tumor Biotherapy, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. 728002719@shsmu.edu.cn.ORCID http://orcid.org/0009-0009-7236-9660

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor cells display profound changes in the metabolism of branched-chain amino acids (BCAA). However, how these changes are regulated to facilitate tumorigenesis is not yet completely understood. Here, we identified pancreatic progenitor cell differentiation and proliferation factor (PPDPF) as a BCAA-responsive protein through extensive screening using stable isotope labeling with amino acids in cell culture (SILAC). PPDPF is upregulated in cholangiocarcinoma to enhance the malignant phenotype of cholangiocarcinoma cells by activating the mTORC1 signaling pathway. Metabolic flux analysis and mechanistic studies revealed that PPDPF prevented the interaction between MCCA and MCCB, thus inhibiting leucine catabolism and activating mTORC1 signaling. Moreover, upon amino acid starvation, ariadne RBR E3 ubiquitin protein ligase 2 (ARIH2) and OTU deubiquitinase 4 (OTUD4) cooperatively regulated the stability of the PPDPF protein by modulating its ubiquitination. Additionally, monocytes/macrophage-derived IL-10 increased the BCAA content in cholangiocarcinoma cells and stabilized the PPDPF protein, even under amino acid starvation conditions. Knockout of PPDPF or restriction of leucine intake significantly inhibits the progression of cholangiocarcinoma in a mouse model. Collectively, we discovered a novel role for PPDPF in promoting the progression of cholangiocarcinoma by activating mTORC1 signaling through the inhibition of leucine catabolism. The present study suggests that targeting PPDPF or decreasing dietary leucine intake may provide a new strategy to improve the treatment efficacy of cholangiocarcinoma.

Indexed as

Amino Acids, Branched-ChainBile Duct NeoplasmsCholangiocarcinomaMechanistic Target of Rapamycin Complex 1AnimalsCell Line, TumorDisease ProgressionGene Expression Regulation, NeoplasticHumansLeucineMiceSignal TransductionAmino Acids, Branched-ChainLeucineMechanistic Target of Rapamycin Complex 1

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.