Evidence map›Paper›PMID 40025000›Full record

ArticleJournal of applied genetics2026

MiRNA signature analysis in LSCC gene expression profiles indicates hsa-miR-299-5p as a new tumor suppressor.

Joanna Janiszewska, Julia Paczkowska, Magdalena Kostrzewska-Poczekaj, Anna Maria Schreiber, Katarzyna Kiwerska, Kinga Bednarek, Ewelina Kowal-Wiśniewska, Zofia Drozdowska, Małgorzata Wierzbicka, Małgorzata Jarmuż-Szymczak and 1 more

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Article in Journal of applied genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Joanna JaniszewskaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Julia PaczkowskaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Magdalena Kostrzewska-PoczekajInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Anna Maria SchreiberInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Katarzyna KiwerskaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Kinga BednarekInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Ewelina Kowal-WiśniewskaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Zofia DrozdowskaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Małgorzata WierzbickaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Małgorzata Jarmuż-SzymczakInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Maciej GiefingInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland. maciej.giefing@igcz.poznan.pl.ORCID http://orcid.org/0000-0002-4760-8246

Funding

Narodowe Centrum Nauki 2016/21/N/NZ5/01422
6 · The paper itself

Abstract

Given the importance of epigenetic mechanisms in the downregulation of tumor suppressor genes and the activation of oncogenes, herein we focused on microRNA silencing as a cause of oncogene activation in laryngeal squamous cell carcinoma (LSCC). In our study, we aimed at identifying regulatory microRNA signatures in LSCC mRNA profiles from our previous analysis. By this approach, we identified 14 overexpressed genes that shared a common regulatory hsa-miR-299-5p signature in LSCC samples. Subsequent RT-qPCR analysis confirmed the downregulation of hsa-miR-299-5p as well as the overexpression of 3 out of 14 genes: PATZ1, PURB, and TFAM in both LSCC cell lines and tumor samples compared to non-cancerous controls. Further, we have demonstrated a direct interaction between hsa-miR-299-5p and TFAM 3'UTR using dual luciferase assay. Importantly, we have shown decreased TFAM protein level after mimicry of hsa-miR-299-5p expression in three LSCC cell lines. Moreover, cell lines with restored activity of hsa-miR-299-5p demonstrated reduced viability compared to cell lines treated with the negative control. In conclusion, we point to hsa-miR-299-5p as a tumor-suppressive microRNA with the potential to regulate TFAM and consequently influence cell viability.

Indexed as

Carcinoma, Squamous CellGenes, Tumor SuppressorLaryngeal NeoplasmsMicroRNAs3' Untranslated RegionsCell Line, TumorDNA-Binding ProteinsGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMitochondrial ProteinsTranscription Factors3' Untranslated RegionsDNA-Binding ProteinsMicroRNAsMitochondrial ProteinsTFAM protein, humanTranscription FactorsHNSCCHsa-miR-299-5pLSCCTFAMTumor suppressor microRNA

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.