Evidence map›Paper›PMID 40022434›Full record

ArticleThe FEBS journal2025

The m6A demethylase FTO promotes C/EBPβ-LIP translation to perform oncogenic functions in breast cancer cells.

Hidde R Zuidhof, Christine Müller, Gertrud Kortman, René Wardenaar, Ekaterina Stepanova, Fabricio Loayza-Puch, Cornelis F Calkhoven

Abstract read
In one paragraph

Article in The FEBS journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Methylation marks breast cancer metastasis: The roles of mThe Journal of biological chemistry · 2026
    Review
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hidde R ZuidhofEuropean Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, The Netherlands.
Christine MüllerEuropean Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, The Netherlands.
Gertrud KortmanEuropean Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, The Netherlands.
René WardenaarEuropean Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, The Netherlands.
Ekaterina StepanovaTranslational Control and Metabolism, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Fabricio Loayza-PuchTranslational Control and Metabolism, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Cornelis F CalkhovenEuropean Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, The Netherlands.ORCID 0000-0001-6318-7210

Funding

Boehringer IngelheimDeutsche Forschungsgemeinschaft 504774163Deutsche Forschungsgemeinschaft 545215964European Research Council 759579KWF Kankerbestrijding 10080
6 · The paper itself

Abstract

N6-methyladenosine (m6A) is a prevalent posttranscriptional mRNA modification involved in the regulation of transcript turnover, translation, and other aspects of RNA fate. The modification is mediated by multicomponent methyltransferase complexes (so-called writers) and is reversed through the action of the m6A-demethylases fat mass and obesity-associated (FTO) and alkB homolog 5 (ALKBH5) (so-called erasers). FTO promotes cell proliferation, colony formation and metastasis in models of triple-negative breast cancer (TNBC). However, little is known about genome-wide or specific downstream regulation by FTO. Here, we examined changes in the genome-wide transcriptome and translatome following FTO knockdown in TNBC cells. Unexpectedly, FTO knockdown had a limited effect on the translatome, while transcriptome analysis revealed that genes related to extracellular matrix (ECM) and epithelial-mesenchymal transition (EMT) are regulated through yet unidentified mechanisms. Differential translation of CEBPB mRNA into the C/EBPβ transcription factor isoform C/EBPβ-LIP is known to act in a pro-oncogenic manner in TNBC cells through regulation of EMT genes. Here we show that FTO is required for efficient C/EBPβ-LIP expression, suggesting that FTO has oncogenic functions through regulation of C/EBPβ-LIP.

Indexed as

Alpha-Ketoglutarate-Dependent Dioxygenase FTOCCAAT-Enhancer-Binding Protein-betaTriple Negative Breast NeoplasmsAdenosineCarcinogenesisCell Line, TumorCell ProliferationEpithelial-Mesenchymal TransitionFemaleGene Expression Regulation, NeoplasticHumansProtein BiosynthesisRNA, MessengerAdenosineAlpha-Ketoglutarate-Dependent Dioxygenase FTOCCAAT-Enhancer-Binding Protein-betaCEBPB protein, humanFTO protein, humanN-methyladenosineRNA, Messengerbreast cancerC/EBPβFTOmRNA translation

Identifiers

PMID40022434
PMCPMC12103066

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.