Evidence map›Paper›PMID 40022179›Full record

ArticleBiotechnology for biofuels and bioproducts2025

SANS investigation of fungal loosenins reveals substrate-dependent impacts of protein action on the inter-microfibril arrangement of cellulosic substrates.

Deepika Dahiya, Zsuzsanna Péter-Szabó, Manjula Senanayake, Sai Venkatesh Pingali, Wellington C Leite, James Byrnes, Garry W Buchko, Pramod Sivan, Francisco Vilaplana, Emma R Master and 1 more

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. A single-domain expansin-like protein fromProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Deepika DahiyaDepartment of Bioproducts and Biosystems, Aalto University, Kemistintie 1, 02150, Espoo, Finland.
Zsuzsanna Péter-SzabóDivision of Glycoscience, Department of Chemistry, KTH Royal Institute of Technology, 106 91, Stockholm, Sweden.
Manjula SenanayakeNeutron Scattering Division and Center for Structural Molecular Biology, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Sai Venkatesh PingaliNeutron Scattering Division and Center for Structural Molecular Biology, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Wellington C LeiteNeutron Scattering Division and Center for Structural Molecular Biology, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
James ByrnesBrookhaven National Laboratory, National Synchrotron Light Source II, Bldg. 745, P.O. Box 5000, Upton, NY, 11973-5000, USA.
Garry W BuchkoEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Pramod SivanDivision of Glycoscience, Department of Chemistry, KTH Royal Institute of Technology, 106 91, Stockholm, Sweden.
Francisco VilaplanaDivision of Glycoscience, Department of Chemistry, KTH Royal Institute of Technology, 106 91, Stockholm, Sweden.
Emma R MasterDepartment of Bioproducts and Biosystems, Aalto University, Kemistintie 1, 02150, Espoo, Finland. emma.master@utoronto.ca.
Hugh O'NeillNeutron Scattering Division and Center for Structural Molecular Biology, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA. oneillhm@ornl.gov.

Funding

X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Sean McSweeney · 2019 to 2026
$38.6M
A Simultaneous SAXS/WAXS Detector System for Solving Biological StructuresS10OD012331 · OD · STATE UNIVERSITY NEW YORK STONY BROOK · PI ALLAIRE, MARC · 2012 to 2012
$1.1M
Biological and Environmental Research DE-AC05-76RL01830Biological and Environmental Research KP1605010Center for Structural Molecular Biology, USA FWP ERKP291Genomic Science Program, USA FWP ERKP752Horizon 2020 Framework Programme 964764NIGMS NIH HHS P30 GM133893NIGMS NIH HHS P30GM133893NIH HHS S10 OD012331Office of Science FICUS -60859
6 · The paper itself

Abstract

backgroundMicrobial expansin-related proteins include fungal loosenins, which have been previously shown to disrupt cellulose networks and enhance the enzymatic conversion of cellulosic substrates. Despite showing beneficial impacts to cellulose processing, detailed characterization of cellulosic materials after loosenin treatment is lacking. In this study, small-angle neutron scattering (SANS) was used to investigate the effects of three recombinantly produced loosenins that originate from Phanerochaete carnosa, PcaLOOL7, PcaLOOL9, and PcaLOOL12, on the organization of holocellulose preparations from Eucalyptus and Spruce wood samples.

resultsWhereas the SANS analysis of Spruce holocellulose revealed an increase in inter-microfibril spacing of neighboring cellulose microfibrils following treatment with PcaLOOL12 and to a lesser extent PcaLOOL7, the analysis of Eucalyptus holocellulose revealed a reduction in the ordered arrangement of microfibrils following treatment with PcaLOOL12 and to a lesser extent PcaLOOL9. Parallel SEC-SAXS characterization of PcaLOOL7, PcaLOOL9, and PcaLOOL12 indicated the proteins likely function as monomers; moreover, all appear to retain a flexible disordered N-terminus and folded C-terminal region. The comparatively high impact of PcaLOOL12 motivated its NMR structural characterization, revealing a double-psi β-barrel (DPBB) domain surrounded by three α-helices-the largest nestled against the DPBB core and the other two part of loops extending from the core.

conclusionsThe SANS analysis of PcaLOOL action on holocellulose samples confirms their ability to disrupt cellulose fiber networks and suggests a progression from reducing regular order in the microfibril arrangement to increasing inter-microfibril spacing. The most impactful PcaLOOL, PcaLOOL12, was previously observed to be the most highly expressed loosenin in P. carnosa. Its structural characterization herein reveals its stabilization through two disulfide linkages, and an extended N-terminal region distal to a negatively charged and surface accessible polysaccharide binding groove.

Indexed as

ExpansinLignocelluloseLooseninSmall-angle neutron scatteringSolution NMR structure

Identifiers

PMID40022179
PMCPMC11869483

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.