ArticleNature metabolism2025
Discovery of metabolites prevails amid in-source fragmentation.
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Article in Nature metabolism, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
18 citing papers in PubMed.
- Trends in Computational Metabolomics: A Perspective on Five Years of Software Development, Challenges, and Opportunities (2021-2025).Analytical chemistry · 2026Review
- Chronic changes in acute zonal occult outer retinopathy mimicking non-progressive retinitis pigmentosa: clinical and laboratory characteristics.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2026Article
- Data-Driven Filter for Detector Oscillation Artifacts in Time-of-Flight Mass Spectrometry.Analytical chemistry · 2026Article
- Assessing the metabolomics "dark matter" by a detectable khipu model.Metabolomics : Official journal of the Metabolomic Society · 2026Article
- From Molecules to Metabolomes, Understanding Symbiosis through Small Molecules.Journal of natural products · 2026Review
- Mapping the mammalian dark metabolome bybioRxiv : the preprint server for biology · 2026Article
- Review
- A versatile toolkit for drug metabolism studies with GNPS2: from drug development to clinical monitoring.Nature protocols · 2026Review
- Article
- The undiscovered natural product potential of Actinomycetes.The Journal of antibiotics · 2026Article
- TidyMass2: advancing LC-MS untargeted metabolomics through metabolite origin inference and metabolic feature-based functional module analysis.Nature communications · 2026Article
- Review
- A resource to empirically establish drug exposure records directly from untargeted metabolomics data.Nature communications · 2025Article
- Improving the Detection of Analyte Degeneracies in Untargeted Liquid Chromatography-Tandem Mass Spectrometry Data.Analytical chemistry · 2025Article
- Learning molecular fingerprints of foods to decode dietary intake.Research square · 2025Article
- Early metabolic predictors of type 2 diabetes mellitus in normoglycemic adults: insights from six-year prospective cohort study.Metabolomics : Official journal of the Metabolomic Society · 2025Article
- Neural Spectral Prediction for Structure Elucidation with Tandem Mass Spectrometry.bioRxiv : the preprint server for biology · 2025Article
- Constructing a consensus serum metabolome.bioRxiv : the preprint server for biology · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
26 authors.
Yasin El Abiead *Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Adriano Rutz *Institute for Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.ORCID http://orcid.org/0000-0003-0443-9902
Simone ZuffaSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-7237-3402
Bashar AmerThermo Fisher Scientific, San Jose, CA, USA.
Shipei XingSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-6227-6959
Corinna BrungsInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-2571-5235
Robin SchmidInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.
Mario S P CorreiaInstitute for Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.
Andres Mauricio Caraballo-RodriguezSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Amir ZarrinparDivision of Gastroenterology, University of California, San Diego, La Jolla, CA, USA.
Helena Mannochio-RussoSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Michael WittingMetabolomics and Proteomics Core, Helmholtz Zentrum München, Neuherberg, Germany.ORCID http://orcid.org/0000-0002-1462-4426
Ipsita MohantySkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Tomáš PluskalInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-6940-3006
Wout BittremieuxDepartment of Computer Science, University of Antwerp, Antwerp, Belgium.ORCID http://orcid.org/0000-0002-3105-1359
Rob KnightShu Chien-Gene Lay Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Andrew D PattersonDepartment of Biochemistry and Molecular Biology and Department of Veterinary and Biomedical Sciences, the Pennsylvania State University, University Park, PA, USA.
Justin J J van der HooftBioinformatics Group, Wageningen University, Wageningen, the Netherlands.ORCID http://orcid.org/0000-0002-9340-5511
Sebastian BöckerInstitute of Computer Science, Friedrich Schiller University Jena, Jena, Germany.ORCID http://orcid.org/0000-0002-9304-8091
Warwick B DunnDepartment of Biochemistry, Cell and Systems Biology, Centre for Metabolomics Research, Institute of Systems, Molecular, and Integrative Biology, University of Liverpool, Liverpool, UK.ORCID http://orcid.org/0000-0001-6924-0027
Roger G LiningtonDepartment of Chemistry, Simon Fraser University, Burnaby, British Columbia, Canada.ORCID http://orcid.org/0000-0003-1818-4971
David S WishartDepartment of Biological Science, University of Alberta, Edmonton, Alberta, Canada.ORCID http://orcid.org/0000-0002-3207-2434
Jean-Luc WolfenderInstitute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland.ORCID http://orcid.org/0000-0002-0125-952X
Oliver FiehnWest Coast Metabolomics Center, University of California, Davis, Davis, CA, USA.ORCID http://orcid.org/0000-0002-6261-8928
Nicola ZamboniInstitute for Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.ORCID http://orcid.org/0000-0003-1271-1021
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA. pdorrestein@ucsd.edu.ORCID http://orcid.org/0000-0002-3003-1030
Funding
Development of Engineered Native Bacteria as a Tool for Functional Manipulation of the Gut MicrobiomeR01AI163483 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEFF M HASTY, Amir Zarrinpar · 2023 to 2026
$3.1MDesign and characterization of bacterial population dynamics in solid tumor modelsR01EB030134 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HASTY, JEFF M, TSIMRING, LEV S · 2021 to 2024
$2.5MBLRD VA I01 BX005707NIAID NIH HHS R01 AI163483NIBIB NIH HHS R01 EB030134U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) NIH U24DK133658
Abstract
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