Evidence map›Paper›PMID 40021553›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2025

Fine mapping of stripe rust resistance gene YrAn1589 in common wheat using Wheat660K SNP array and BSR-Seq.

Weihao Hao, Yingjie Wu, Qi Guo, Jingchun Wu, Meng Lin, Qiwei Hu, Erwin Tandayu, Jie Lu, Hongqi Si, Chuanxi Ma and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Weihao HaoKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.
Yingjie WuKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.
Qi GuoFaculty of Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia.ORCID http://orcid.org/0000-0002-3528-2533
Jingchun WuNational Key Laboratory of Wheat Improvement, Shandong Agricultural University, 61 Daizong Street, Tai'an, 271018, Shandong Province, China.
Meng LinKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.
Qiwei HuKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.
Erwin TandayuAgriculture Victoria, 5 Ring Road, Bundoora, VIC, 3083, Australia.ORCID http://orcid.org/0000-0003-4898-5470
Jie LuKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.
Hongqi SiKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.ORCID http://orcid.org/0000-0002-7431-3566
Chuanxi MaKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China.ORCID http://orcid.org/0000-0003-1042-036X
Xiaobo WangCollege of Agronomy, Anhui Agricultural University, Hefei, 230036, China.ORCID http://orcid.org/0000-0002-2810-9249
Can ChenKey Laboratory of Wheat Biology and Genetic Improvement On Southern Yellow and Huai River Valley, Ministry of Agriculture and Rural Affairs, College of Agronomy, Anhui Agricultural University, Hefei, 230036, China. chencan@ahau.edu.cn.ORCID http://orcid.org/0000-0002-0785-918X

Funding

Anhui Provincial and Ministerial Collaborative Innovation Center for Food Crops APMCIC-FCJiangsu Collaborative Innovation Center for Modern Crop Production JCIC-MCPNatural Science Research Project of Anhui Educational Committee 2022AH050887the Agriculture Research System CARS-03the key scientific and technological breakthroughs in Anhui Province 2021d06050003
6 · The paper itself

Abstract

key messageA new stripe rust resistance gene YrAn1589 in Chinese wheat Annong1589 was mapped to a 160.9-166.6 kb interval on chromosome arm 3BL and co-segregated with a marker CAPS9 developed from candidate gene TraesCS3B03G1054600.  Stripe rust, caused by Puccinia. striiformis f. sp. tritici (Pst), is a devastating fungal disease that can significantly reduce wheat yield. The Chinese wheat cultivar Annong1589 demonstrates high resistance against the predominant Pst races in the Huang-Huai valley wheat region. The present study aimed to identify the stripe rust resistance gene in Annong1589. Genetic analysis indicated that the resistance in Annong1589 was conferred by a single dominant gene, provisionally designated YrAn1589. Using Wheat660K SNP array, bulked segregant RNA sequencing and new molecular markers developed, the resistance gene was mapped to a 160.9-166.6 kb region between CAPS8 and CAPS10 on chromosome 3BL based on IWGSC CS RefSeq v2.1 and eight other reference genome sequences, including eight high-confidence annotated genes. Transcriptome and qRT-PCR analyses revealed significantly upregulated expression of TraesCS3B03G1054600 in resistant plants following CYR32 inoculation, suggesting it is a potential candidate gene for YrAn1589. A functional marker CAPS9 developed from a A/G polymorphic SNP in the candidate co-segregated with YrAn1589 in the F

Indexed as

Disease ResistanceGenes, PlantPlant DiseasesPolymorphism, Single NucleotideTriticumBasidiomycotaChromosome MappingChromosomes, PlantGenetic MarkersPucciniaGenetic Markers

Identifiers

PMID40021553

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.