Evidence map›Paper›PMID 40020213›Full record

ArticleNeurology(R) neuroimmunology & neuroinflammation2025

Single-Cell RNA Sequencing in Incontinentia Pigmenti With Neonatal Encephalopathy Reveals Broad Immune Activation Moderated by Steroids.

Shekeeb S Mohammad, Velda Han, Brian Gloss, Brooke Keating, Hiroya Nishida, Xianzhong Lau, Ruwani Dissanayake, Shrujna Patel, Russell C Dale

Abstract readCase Reports
In one paragraph

Article in Neurology(R) neuroimmunology & neuroinflammation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shekeeb S MohammadKids Neuroscience Centre, The Children's Hospital at Westmead, Sydney Children's Hospitals Network, NSW, Australia.ORCID 0000-0003-1219-4781
Velda HanKhoo Teck Puat-National University Children's Medical Institute, National University Health System, Singapore.ORCID 0000-0003-4633-4316
Brian GlossWestmead Research Hub, Westmead Institute for Medical Research, NSW, Australia.
Brooke KeatingKids Neuroscience Centre, The Children's Hospital at Westmead, Sydney Children's Hospitals Network, NSW, Australia.
Hiroya NishidaKids Neuroscience Centre, The Children's Hospital at Westmead, Sydney Children's Hospitals Network, NSW, Australia.
Xianzhong LauAustralian Genome Research Facility, Melbourne, VIC, Australia; and.
Ruwani DissanayakeAustralian Genome Research Facility, Westmead, NSW, Australia.
Shrujna PatelThe Children's Hospital at Westmead Clinical School, Faculty of Medicine and Health, University of Sydney, NSW, Australia; the University of Sydney, School of Medical Sciences and Discipline of Child and Adolescent Health, Faculty of Medicine and Health, NSW, Australia.
Russell C DaleKids Neuroscience Centre, The Children's Hospital at Westmead, Sydney Children's Hospitals Network, NSW, Australia.ORCID 0000-0002-2495-1826

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesDNA variations in the NF-kappa-B essential modulator (

methodsSingle-cell RNA (ribonucleic acid) sequencing (scRNAseq), using the HIVE single-cell system, was performed on a neonate with IP, before and after steroid treatment, compared with a sex-matched healthy control toddler.

resultsA total of 20,411 cells were sequenced and clustered into 10 cell types. In IP compared with control, upregulated significant gene set enrichment analysis gene ontology pathways (FDR <0.05) included defense response, complement activation, humoral immune response, and phagocytosis across all cell types. After steroid treatment, these pathways were predominantly downregulated in monocytes and neutrophils. The upregulated genes in IP that became downregulated after steroid treatment were interferon-related genes, oligoadenylate synthases, and immunoglobulin genes. DISCUSSION: IP-associated loss of

Indexed as

Brain DiseasesIncontinentia PigmentiHumansI-kappa B KinaseInfant, NewbornSequence Analysis, RNASingle-Cell AnalysisI-kappa B KinaseIKBKG protein, human

Identifiers

PMID40020213
PMCPMC11876987

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.