ArticleScientific data2025
Full-length transcriptome analysis of a bloom-forming dinoflagellate Scrippsiella acuminata (Dinophyceae).
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
3 citing papers in PubMed.
- Environmental drivers and key taxa shaping diatom-dinoflagellate ratios in eutrophic coastal waters.Marine life science & technology · 2026Article
- Review
- Transitions of the Bacteria-Fungi Microbiomes Associated with Different Life Cycle Stages of DinoflagellateMicroorganisms · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
The dinoflagellate Scrippsiella acuminata (formerly Scrippsiella trochoidea) is a cosmopolitan species commonly forms dense blooms worldwide. It also has been adopted as representative species for life history studies on dinoflagellates. The peculiar genetic features of its large nuclear genome make the whole-genome sequencing highly challenging. Herein, we employed single-molecule real-time (SMRT) sequencing technology to acquire the full-length transcriptome of S. acuminata at different life stages (vegetative cells at different growth stages and resting cysts). A total of 51.44 Gb clean SMRT sequencing reads were generated, which finally yielded 226,117 non-redundant full-length non-chimeric (FLNC) reads. Among them, 78,393 long non-coding RNA (lncRNA), 550 putative transcription factors (TF) members from 19 TF families, 67,212 simple sequence repeats (SSRs), and 116,417 protein coding sequences (CDSs) were identified. This is the first report on full-length transcriptome of Thoracosphaeraceae in Dinophyceae, which is valuable for future genome annotation in this order. Our dataset provides a reference transcriptomic background for life history studies on dinoflagellates and will contribute to understanding molecular mechanisms underlying S. acuminata blooms.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.