Evidence map›Paper›PMID 40014587›Full record

ArticlePloS one2025

Prediction and validation of anoikis-related genes in neuropathic pain using machine learning.

Yufeng He, Ye Wei, Yongxin Wang, Chunyan Ling, Xiang Qi, Siyu Geng, Yingtong Meng, Hao Deng, Qisong Zhang, Xiaoling Qin and 1 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yufeng HeDepartment of Massage, The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning, China.
Ye WeiDepartment of Rehabilitation Medicine, The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning, China.ORCID 0009-0003-6314-9793
Yongxin WangDepartment of Rehabilitation Medicine, The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning, China.
Chunyan LingDepartment of Rehabilitation Medicine, The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning, China.
Xiang QiGraduate School, Henan University of Chinese Medicine, Zhengzhou, China.
Siyu GengSecond Clinical Medical College, Henan University of Chinese Medicine, Zhengzhou, China.
Yingtong MengGraduate School, Guangxi University of Chinese Medicine, Nanning, China.
Hao DengGraduate School, Guangxi University of Chinese Medicine, Nanning, China.
Qisong ZhangMedical College, Guangxi University, Nanning, China.
Xiaoling QinSchool of Pharmacy, Guangxi University of Chinese Medicine, Nanning, China.
Guanghui ChenDepartment of Rehabilitation Medicine, The First Affiliated Hospital of Guangxi University of Chinese Medicine, Nanning, China.ORCID 0009-0005-2956-4402

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNeuropathic pain (NP) can be induced by a variety of clinical conditions, such as spinal cord injury, lumbar disc herniation (LDH), lumbar spinal stenosis, diabetes, herpes zoster, and spinal cord tumors, and inflammatory stimuli. The pathogenesis of NP is extremely complex. Specifically, in LDH, the herniated nucleus pulposus exerts mechanical pressure on nerve roots, triggering local inflammation and consequent NP. Anoikis, a special form of programmed cell death, is closely related to the progression of NP. In this study, we sought to clarify the molecular characteristics of anoikis-related genes in NP, providing novel insights for the diagnosis and treatment of NP.

methodsWe screened NP-related genes based on the GSE124272 dataset and obtained 439 anoikis-related genes from the GeneCards database. Through Least Absolute Shrinkage and Selection Operator (LASSO) and Support Vector Machine (SVM) machine learning algorithms, six key hub genes were identified: hepatocyte growth factor (HGF), matrix metalloproteinase 13 (MMP13), c-abl oncogene 1, non-receptor tyrosine kinase (ABL1), elastase neutrophil expressed (ELANE), fatty acid synthase (FASN), and long non-coding RNA (Linc00324). Functional enrichment analyses, including Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG), alongside Gene Set Enrichment Analysis (GSEA) and immune infiltration analysis, were performed on these hub genes. Additionally, transcription factors and potential therapeutic drugs were predicted. We also used rats to construct an NP model and validated the analyzed hub genes using hematoxylin and eosin (H&E) staining, real-time polymerase chain reaction (PCR), and Western blotting assays.

resultsOur data indicated that anoikis-related genes have diagnostic value in NP patients, as confirmed by experimental results. Moreover, this study elucidated the role of these genes in immune infiltration during the pathogenesis of NP and identified potential therapeutic drugs targeting these key genes.

conclusionThis study further explores the pathogenesis of NP and provides certain reference value for developing targeted therapeutic strategies, thereby improving NP management.

Indexed as

AnoikisMachine LearningNeuralgiaAnimalsHumansMaleRatsRats, Sprague-DawleySupport Vector Machine

Identifiers

PMID40014587
PMCPMC11867322

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